Pairwise Alignments

Query, 615 a.a., protein translocase subunit SecD from Serratia liquefaciens MT49

Subject, 681 a.a., protein translocase subunit SecD from Paraburkholderia sabiae LMG 24235

 Score =  508 bits (1309), Expect = e-148
 Identities = 285/622 (45%), Positives = 389/622 (62%), Gaps = 32/622 (5%)

Query: 2   LNRYPLWKYLMLIVVIFIGLLYALPNIYGEDPAVQITGARG-VAASETTLDQVRTVLEKD 60
           +NRYPLWKY +++V + IGL+Y LPN +GE PAVQ++  +  V    TTL QV   L   
Sbjct: 1   MNRYPLWKYAVMLVALVIGLVYTLPNFFGEAPAVQVSSGKATVKLDSTTLSQVEAALASS 60

Query: 61  KITSKSIALENGA----ILARFSNPDIQLRAREALMAELGD-----KFVVALNLAPATPA 111
           +I    +  +N      I  R  + D QLR ++ L   L       +F+VALNL  A+P 
Sbjct: 61  QIKPDDVTFDNSTQNANIRVRLKDTDTQLRVKDLLQKALNSDPSDPQFIVALNLQSASPH 120

Query: 112 WLAMLGAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDTLRSELREKGIPYASIRKL 171
           WL  L A PM LGLDLRGGVHFL++VDM  AL+K  +      R+ LR+KGI    + + 
Sbjct: 121 WLTALHALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDASDARTLLRDKGIRDGGVNRT 180

Query: 172 DNNGVEVRFRDDAARDQAISYLSPRQRDMVFSAN----GSNTLKANLTDARLSEAREYAV 227
               V V F D    + A   L+    ++ ++      G   +    T A      + A+
Sbjct: 181 GQT-VVVNFADQDVAETARKQLATGVAELQWATQPNPAGGFQVVGTFTPAVQKTVEDAAL 239

Query: 228 QQNITILRNRVNQLGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTN 287
           +QNIT L NRVN+LGVAEP++Q+QGSDRIVVELPG+QDTA+AK+I+G TATLE RL + N
Sbjct: 240 KQNITTLHNRVNELGVAEPVIQQQGSDRIVVELPGVQDTAKAKDIIGRTATLEARLADPN 299

Query: 288 ADVTAAANGRVPGDSEVKDTREGQPVVLYKRVILTGDHITDSTSSTDEYNQPQVNISLDS 347
             +    +  VP   E+       PV+L K VI TGD I D+++  DE+ +P VNI LDS
Sbjct: 300 G-LHPNPSDPVPAGDELFTQGNAVPVLLRKAVIFTGDRIIDASAGFDEHQRPSVNIRLDS 358

Query: 348 AGGTAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKQEEVINVANIQSRLGNSFR 407
           AGG A+ + ++DNIGKPMA +  E K  G              EV+ VA IQS LG+ F+
Sbjct: 359 AGGRAVRSVSRDNIGKPMAMVLFE-KGKG--------------EVLTVATIQSELGDRFQ 403

Query: 408 ITGIGNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGQQNITQGLEACLWGLVASIVF 467
           ITG   P  A  L+LLLRAG+L AP+ I+EERTIGP+LG  NI +G  + +WG  A  VF
Sbjct: 404 ITGQPTPQAATDLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFHSVVWGFAAIAVF 463

Query: 468 MVVWYRKFGMIATTALVANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINER 527
           M+ +Y  FG+I+  AL  NL+L++ V+S+L  ATLT+PGIA I L L +A+DANVLINER
Sbjct: 464 MIAYYMLFGLISMIALSVNLLLLIAVLSMLQ-ATLTLPGIAAIALALGMAIDANVLINER 522

Query: 528 IKEELKNGRSVQQAIHEGYKGAFSSIVDANITTLITAIILYAVGTGSIKGFAITTAIGVA 587
           ++EEL+NG   Q AI  GY  A+++I+D+N+TTLI  + L A G+G ++GFA+   IG+ 
Sbjct: 523 VREELRNGAPPQLAIQNGYAHAWATILDSNVTTLIAGLALLAFGSGPVRGFAVVHCIGIM 582

Query: 588 TSMFTAIVGTRAIVNLLYGGKR 609
           TSMF+A+  +R +VN+ YGGK+
Sbjct: 583 TSMFSAVFFSRGLVNVWYGGKK 604