Pairwise Alignments

Query, 615 a.a., protein translocase subunit SecD from Serratia liquefaciens MT49

Subject, 530 a.a., protein translocase subunit SecD from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  284 bits (727), Expect = 6e-81
 Identities = 179/505 (35%), Positives = 274/505 (54%), Gaps = 31/505 (6%)

Query: 121 MKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDTLRSELREKGIPYASIRKLDNNGVEVRF 180
           + LGLDL+GG + L+EVD+     K     ++ +R  L   G+     ++ +  GV V  
Sbjct: 45  LNLGLDLQGGSYLLLEVDVPAMREKRVTNLIEDVRVTLNGAGVATNGFQR-EAGGVVVTL 103

Query: 181 RDDAARDQAISYLSPR--------QRDMVFSANGSNTLKANLTDARLSEAREYAVQQNIT 232
            + A  D A   L           Q +   +  G N ++   TDA L+     AV Q+I 
Sbjct: 104 ANPAQGDAAFKALQQLGGQVGPGGQAERTATRLGDNRIRFAYTDAALNGMGATAVDQSIE 163

Query: 233 ILRNRVNQLGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNADVTA 292
           ++R R++ LG  EP + RQG+DRIVV+ PG  D ++ +E++G TA L F++V+    V  
Sbjct: 164 VVRRRIDSLGTREPSITRQGADRIVVQAPGESDPSKLEEVIGQTAQLTFQMVDVENSVQD 223

Query: 293 AANGRVPGDSEVKDTREGQPVVLYKRVILTGDHITDSTSSTDEYNQPQVNISLDSAGGTA 352
           A  GRVP DSE+    +G P ++ KRV+++G+++T +   +D+  +P ++   D AG   
Sbjct: 224 ALAGRVPPDSELLQGEDGTPYLVKKRVLVSGENLTRAGVGSDQSGRPAIDFRFDGAGARR 283

Query: 353 MSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKQEEVINVANIQSRL-GNSFRITGI 411
               T  N+ KP A                   ++   +VI+   IQS +   S +ITG 
Sbjct: 284 FGEATAANLQKPFA-------------------IILDGKVISAPTIQSAITSGSGQITGN 324

Query: 412 GNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGQQNITQGLEACLWGLVASIVFMVVW 471
            +  EA  L  LL  GAL AP+ + E RT+   LG   +  G  +   G    ++FM++ 
Sbjct: 325 FSIQEAATLVNLLNGGALPAPLNVEERRTVTAELGADAVAAGALSTAVGFAIIVLFMILA 384

Query: 472 Y-RKFGMIATTALVANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKE 530
           Y   FG ++   LV N VLIV  MSL   ATLT+PGIAG++LT AVAVDANVLI ER+++
Sbjct: 385 YGLLFGGVSVVGLVLNGVLIVAAMSLTQ-ATLTLPGIAGLILTFAVAVDANVLIYERMRD 443

Query: 531 ELKNGRSVQQAIHEGYKGAFSSIVDANITTLITAIILYAVGTGSIKGFAITTAIGVATSM 590
           E + GRSV  ++  G+  A  +IVDAN+TTL+ A I++  G G ++GFA T  IGV TS+
Sbjct: 444 EARAGRSVIASMDAGFNKAMGTIVDANLTTLVAAGIMFVFGEGPVRGFAWTLTIGVFTSV 503

Query: 591 FTAIVGTRAIVNLLYGGKRINKLSI 615
           F++++  + ++       +  KL I
Sbjct: 504 FSSVLVAQVLLGYWLKTAKPKKLPI 528