Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 606 a.a., chloride channel protein from Paraburkholderia sabiae LMG 24235

 Score =  116 bits (290), Expect = 2e-30
 Identities = 107/382 (28%), Positives = 170/382 (44%), Gaps = 29/382 (7%)

Query: 81  LAFILSAALAMLGYYLVRRFAPEA-GGSGIPEIEGALEELRPVRWWRVIPVKFIGGMGTL 139
           LA I    +  L   L+ RF  E   G GIPE   A+   +     +V  +K +     +
Sbjct: 68  LAVIAVPVIGGLLVGLIARFGSEQIRGHGIPEAIEAILFGKSKMSPKVAILKPLASAIAI 127

Query: 140 GAGMVLGREGPTVQMGGNVGRMVLDIFRMRGAEARHSLLATGAAAGLSAAFNAPLAGILF 199
           G+G   G EGP +  GG +G +V   F +  AE R +LL  GA AG++A F  P+A +L 
Sbjct: 128 GSGGPFGAEGPIIMTGGAIGSLVAQYFHLSSAE-RKALLVAGAVAGMTAVFGTPVAAVLL 186

Query: 200 IIE----EMRPQFRYNLISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSAPINTLWLY 255
            IE    E+RP+      S+  V I   ++     L  G G +  +  L   P+  +   
Sbjct: 187 AIELLLFELRPR------SLLPVAIACAVAGFTRPLLLGSGPLFPLQTLPLGPLGMV-SS 239

Query: 256 LVLGAIFGAVGVMFNALVFRTQDMFARLHGGKMRKILLMGGLLGGIC-GILGLIQPEAAG 314
            V G I GA+    +  +++ +D+F RL    M         LG +  GI G  QP   G
Sbjct: 240 AVAGLIAGALSWGLSTWLYKVEDLFGRLPIHWM-----WWPALGAVAVGIGGYCQPRTLG 294

Query: 315 GGFGLIPIAAAGNYSVGMLMFIFITRVITTLLCFGSGAPGGIFAPMLALGTLFGTAFGLA 374
            G+ +I      + +V  ++ I + + +  ++   SG  GG+ AP+L +G   G    LA
Sbjct: 295 VGYDVIGDLLQNHLAVQAVISIVLVKAVIWVIALASGTSGGVLAPLLMMGAGVG---ALA 351

Query: 375 GGHLFPEYGIEAGTFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIITCLGATL 434
             ++    G E   + +  M A     +RAP+   V   E+T +   +LP+    L A+ 
Sbjct: 352 APYM---PGGEPAVWPLIFMAAALGGMMRAPVMAAVFAFELTGDANALLPL----LAASA 404

Query: 435 VAQFLGGKPLYSSILARTLQRQ 456
           VA       +  SIL   + R+
Sbjct: 405 VAYGFTVLFMRRSILTEKIARR 426