Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 435 a.a., chloride channel protein from Paraburkholderia sabiae LMG 24235

 Score =  155 bits (391), Expect = 3e-42
 Identities = 129/428 (30%), Positives = 212/428 (49%), Gaps = 44/428 (10%)

Query: 47  GLLGVAFDKAVDWVQQQRFSALAQVADYWILVWPLAFILSAALAMLGYYLVRRFAPEAGG 106
           GL+ V + + +D+     + A  +   Y  ++W L  +L+ A+  LG ++ RRF P A G
Sbjct: 33  GLVAVMYARLIDF----GYDAFLR---YTAMLWWLPLVLTPAVGALGVWITRRFFPGAEG 85

Query: 107 SGIPEIEGALEELRPVRWWRVIPVKFIGG------MGTLGAGMVLGREGPTVQMGGNVGR 160
           SGIP++   L E R +   R++ ++ +GG      +  LG G  +GREGPT+ +G ++  
Sbjct: 86  SGIPQVIATLHEGRDLGP-RLLNLRILGGKIAVSFLSILG-GFTIGREGPTIHVGASLMF 143

Query: 161 MVLDIF-----RMRGAEARHSLLATGAAAGLSAAFNAPLAGILFIIEEMRPQF--RYNLI 213
            +   +      +RGAE    L   GAAAGLSAAFNAPLAG++F IEE+   F  R + +
Sbjct: 144 SLRRFYPERLRNIRGAELERKLALAGAAAGLSAAFNAPLAGVVFAIEELTRSFEQRTSGV 203

Query: 214 SIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSAPINTLWLYLVLGAIFGAVGVMFNALV 273
            I A+    I+S  +   +   G++   G     P       ++LG + G  G +F  L+
Sbjct: 204 LITAIIFAGIVSLGLQGNYTYFGTIDIDGHF---PDLLAVAVVMLGVVTGVAGGVFCWLL 260

Query: 274 FRTQD-MFARLHGGKMRKILLMGGLLGGICGILGLIQPEAAGG-----GFGLIPIAAAGN 327
             T+  M A+L   +    +  G   G    ++G+    AAGG     G+        GN
Sbjct: 261 LNTERWMPAKLVAWRKTHPVAFGAACGLFIAVIGV----AAGGHTFGSGYAEARGMLEGN 316

Query: 328 YSVGMLMFIFITRVITTLLCFGSGAPGGIFAPMLALGTLFGTAFGLAGGHLFPEYGIEAG 387
             +G    +   ++ + +  +  GAPGG+FAP LA+G   G A  L  G +      +  
Sbjct: 317 SQLGATYPLL--KMASMVGSYLPGAPGGLFAPSLAIGAGIGNALHLVFGQM------QLP 368

Query: 388 TFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLVAQFLGGKPLYSS 447
                GM    AA  ++P+T  V+V+EM + + L+L ++ T L ++ V++ L   PLY +
Sbjct: 369 MLIALGMVGYLAAVTQSPITAFVIVIEMINGHALVLSLMATALISSQVSK-LFAPPLYEA 427

Query: 448 ILARTLQR 455
           +  R + R
Sbjct: 428 LAQRYIGR 435