Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 577 a.a., ClcB-like voltage-gated chloride channel protein from Paraburkholderia sabiae LMG 24235

 Score =  150 bits (379), Expect = 1e-40
 Identities = 101/341 (29%), Positives = 174/341 (51%), Gaps = 22/341 (6%)

Query: 127 VIPVKF-----IGGMGTLGAGMVLGREGPTVQMGGN----VGRMV-LDIFRMRGAEARHS 176
           V+PV+      +  + T+ +G  +GREGP VQ+       +GR+V  D  R+R       
Sbjct: 112 VVPVRVSLWRSVSSLFTISSGGSIGREGPMVQLAALGASLIGRVVHFDPPRLR------L 165

Query: 177 LLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAVFIGVIMSSVVFQLFNGEG 236
           L+A GAAAG+++A++AP+AG  F+ E +         S   V +  +++++V + F G  
Sbjct: 166 LVACGAAAGITSAYSAPIAGAFFVTEIVLGSIAME--SFGPVVVSSVVANIVMREFAGYK 223

Query: 237 SVIAVGKLSSAPINTLWLYLVLGAIFGAVGVMFNALVFRTQDMFARLHGGKMRKILLMGG 296
               +          + L++ LG + G     F  L+  ++  F RL      ++ L GG
Sbjct: 224 PPYEMPVFPPVAGLEVLLFVALGLLCGTAAPQFLRLIDTSKSAFGRLRVPLPLRLAL-GG 282

Query: 297 LLGGICGILGLIQPEAAGGGFGLIPIAAAGNYSVGMLMFIFITRVITTLLCFGSGAPGGI 356
           L   I GIL +  PE  G G+ ++       ++   L+ + + ++I T    GSGA GG+
Sbjct: 283 L---IVGILSIWTPEVWGNGYSVVNSILHSPWTWTALVVVLVFKLIATAATVGSGAVGGV 339

Query: 357 FAPMLALGTLFGTAFGLAGGHLFPEYGIEAGTFAIAGMGALFAATVRAPLTGIVLVLEMT 416
           F P L +G + G+ FG+    L+P        +A+ GMGA  A   +APL  I+++ EMT
Sbjct: 340 FTPTLFVGAVIGSLFGIGMNALWPHATSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMT 399

Query: 417 DNYQLILPMIITCLGATLVAQFLGGKPLYSSILARTLQRQE 457
            +YQ++LP++++C+ A   A+ +G   +Y   L R  + +E
Sbjct: 400 LSYQVVLPLMLSCVVAYFAARAIGKTSMYDITLHRNREEKE 440