Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 465 a.a., chloride channel protein from Paraburkholderia sabiae LMG 24235

 Score =  135 bits (341), Expect = 2e-36
 Identities = 129/475 (27%), Positives = 216/475 (45%), Gaps = 37/475 (7%)

Query: 19  SDAVRQLLRRDKTPVAILFMAALVGTMAGLLGVAFDKAVDWVQQQRFSALAQVADYWILV 78
           S ++ + +RR      I ++ A+     GL  V + + +D+          Q    W   
Sbjct: 8   SSSIGRRVRRLWRQYGIFWLGAIA---VGLTAVFYARLIDYGYNAFLDLQKQ--HRW--- 59

Query: 79  WPLAFILSAALAMLGYYLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVIPVKFIGG--- 135
             L  +L+ A+A L  +L RRF   A GSGIP++   L         R++    + G   
Sbjct: 60  --LTLLLTPAVAALSVWLTRRFFRGAEGSGIPQVIATLHSNTSAAGARLLTFPILLGKIL 117

Query: 136 ---MGTLGAGMVLGREGPTVQMGGNVGRMVLDIFRMRGAEARHSLLATGAAAGLSAAFNA 192
              +  LG G  +GREGPTVQ+G  +   +  ++    A     L+  GAAAGLSAAFN 
Sbjct: 118 VSFLAILG-GFTIGREGPTVQVGAALMFNLRRLYPRSNALIERQLVLAGAAAGLSAAFNT 176

Query: 193 PLAGILFIIEEMRPQFRYNLISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSAPINTL 252
           PLAGI+F IEE+   F      +  +   +I++ ++    NG  +      + +     L
Sbjct: 177 PLAGIVFAIEELTRSFEARASGV--LITAIIIAGIIALGLNGNYTYFGTIDIGAHFPQLL 234

Query: 253 WLYLVL-GAIFGAVGVMFNALVFRTQDMFAR-LHGGKMRKILLMGGLLGGICGILGLIQP 310
            + +V+ G + G  G +F  L+  T       L      + +    L G    ++GLI  
Sbjct: 235 AVAVVITGIVTGIAGGIFGWLLLNTDRWIPEPLRRLNSERPIAFAALCGLAIAVIGLI-- 292

Query: 311 EAAGGGFGLIPIAAAG-NYSVGMLMFIF-ITRVITTLLCFGSGAPGGIFAPMLALGTLFG 368
            + G  FG     A G  Y    L  ++ + ++ + +  +  G PGGIFAP L++G  FG
Sbjct: 293 -SGGTTFGSGYAEARGLLYGTEHLSMLYPLLKMASMIGSYLPGIPGGIFAPSLSIGAGFG 351

Query: 369 TAFGLAGGHLFPEYGIEAGTFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIIT 428
                   H+F +        A+A +G L AA  ++P+T  V+V+EM + + L++ ++ T
Sbjct: 352 NVL-----HMFFDDMQLPMLIALAMVGYL-AAVTQSPITSFVIVMEMINGHALVISLMAT 405

Query: 429 CLGATLVAQFLGGKPLYSSILAR----TLQRQEASQASEAADKTGKENTTNAVNT 479
            L ++ +A  L   PLY ++  R     +   +A+ A+E   K  +    N + T
Sbjct: 406 ALVSSRIAS-LFAPPLYEALSLRYMTPAVVTPDAAVAAEGRSKDEESGDDNQLTT 459