Pairwise Alignments

Query, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Serratia liquefaciens MT49

Subject, 288 a.a., N-acetylmuramoyl-L-alanine amidase from Paraburkholderia sabiae LMG 24235

 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 53/136 (38%), Positives = 72/136 (52%), Gaps = 19/136 (13%)

Query: 69  QLRVSAHCLI-----RRDGEII--QYVPFDRRAWHAGVSSYQGRERCNDFSIGIEL---- 117
           Q +VSAH +I     ++ GE I  Q VP  +RAWHAG+SS+QG    N  SIGIE     
Sbjct: 66  QQQVSAHYVIPDHPRQKAGEPIIWQLVPESQRAWHAGLSSWQGTTELNAASIGIENVNLG 125

Query: 118 -----EGTDHVAFTPQQYQSLNVVTALLIRHYPTLAAHITGHSNIAPGRKTDPGPAFDW- 171
                +G     + P+Q  ++  ++  ++  Y      + GHS+IAP RK DPGP F W 
Sbjct: 126 PIDTPQGRTWQPYPPEQVNAMIRLSKDIVTRYGIPPTRVVGHSDIAPQRKIDPGPLFPWK 185

Query: 172 GLYLASLEQPGGPDDA 187
            LY A +     PDDA
Sbjct: 186 QLYDAGI--GAWPDDA 199