Pairwise Alignments

Query, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Serratia liquefaciens MT49

Subject, 190 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Pectobacterium carotovorum WPP14

 Score =  277 bits (708), Expect = 1e-79
 Identities = 130/180 (72%), Positives = 146/180 (81%)

Query: 1   MQLEQGWIVGVTRVVSPHCDLRPNEEAPSLLVIHNISLPPGEFGGPYIDRLFTGTLDPAD 60
           M LE GW+  +T   SPH D RPN E PSLLVIHNISLPPGEFGGPYID+LFT TLDP+ 
Sbjct: 1   MLLENGWLSDITHTPSPHYDGRPNNEVPSLLVIHNISLPPGEFGGPYIDQLFTATLDPSA 60

Query: 61  HPYFSDIHQLRVSAHCLIRRDGEIIQYVPFDRRAWHAGVSSYQGRERCNDFSIGIELEGT 120
           HPYFSDI  LRV+AHCLIRRDG+I QYVPFD+RAWHAGVS ++GRERCNDFSIGIELEGT
Sbjct: 61  HPYFSDISHLRVAAHCLIRRDGQITQYVPFDQRAWHAGVSVFEGRERCNDFSIGIELEGT 120

Query: 121 DHVAFTPQQYQSLNVVTALLIRHYPTLAAHITGHSNIAPGRKTDPGPAFDWGLYLASLEQ 180
           D + FT QQY SL  +T LL+R YP   + ITGHS+IAPGRKTDPGPAFDW  Y   L++
Sbjct: 121 DTLPFTAQQYHSLVAITRLLMRAYPITPSRITGHSDIAPGRKTDPGPAFDWDGYHRLLQE 180