Pairwise Alignments

Query, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Serratia liquefaciens MT49

Subject, 226 a.a., N-acetylmuramoyl-L-alanine amidase from Magnetospirillum magneticum AMB-1

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 58/160 (36%), Positives = 77/160 (48%), Gaps = 21/160 (13%)

Query: 16  SPHCDLRPNEEAPSLLVIHNISLPPGEFGGPYIDRLFTGTLDPADHPYFSDIHQLRVSAH 75
           SP+ + RP       LV+H   +  GE     + RL                 Q +VSAH
Sbjct: 8   SPNFEPRPAGAIVDTLVLHYTGMESGEAA---LARLCDA--------------QAKVSAH 50

Query: 76  CLIRRDGEIIQYVPFDRRAWHAGVSSYQGRERCNDFSIGIELEGTDHV----AFTPQQYQ 131
            +I  DG +   VP D RAWHAG SS++G    N  SIGIEL    H     AF   Q +
Sbjct: 51  YVIEEDGRVFALVPEDMRAWHAGASSWRGEPDVNSRSIGIELVNPGHEFGYRAFPGAQIE 110

Query: 132 SLNVVTALLIRHYPTLAAHITGHSNIAPGRKTDPGPAFDW 171
           SL  +   ++  +P  A ++ GHS++AP RK DPG  F W
Sbjct: 111 SLIRLCRGILERHPIPARNVVGHSDVAPTRKEDPGELFPW 150