Pairwise Alignments

Query, 399 a.a., protein transport protein HofC from Serratia liquefaciens MT49

Subject, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

 Score =  216 bits (551), Expect = 7e-61
 Identities = 139/399 (34%), Positives = 210/399 (52%), Gaps = 9/399 (2%)

Query: 6   LFLWQAIDPHGQLREGELMSGKKNEVSQWLIEQGLQPCQINSGKRIS---PGQWRGEPLI 62
           L+ W   D +G    G+        V   LI QG+    +     ++   P +       
Sbjct: 7   LYHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASLRPASGLAFSLPKRREKADPA 66

Query: 63  QFTRQLATLLQAGLPLVSGLQLLAAEHPSAAWRCLLREVSEQVRQGQPFSEVIAEQHAVF 122
            F+RQLATLL+AG+PL+   +++      AA   LL  + + V  G   ++ +    A F
Sbjct: 67  GFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADALQRHPAWF 126

Query: 123 PLIYRQLIAIGELTGHLDECCLQLAQQQEAQQKLQKKVIKALRYPLFICAVALLVSILML 182
             +Y  L+ +GE +G LD    QLA   E ++ L KKV KA+ YPL +    L VS ++L
Sbjct: 127 DALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTGLGVSAILL 186

Query: 183 VMVLPEFAGVYQSFNAPLPWFTQGLLNLSTLLIDSGPWLAAILVCM--AYTYLRRLH-PQ 239
           + V+P+F  ++    A LP FTQ ++NLST L    P L  + V M  A   L R H P 
Sbjct: 187 LEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMGVAVRQLYRQHAPA 246

Query: 240 PQWRRREQAALLRLPLIAHLIKGGCLSQIFRILAMTQQAGLSLVDGLAAAALSVDNLFYR 299
             W  R    +L LP+   L+    L++  R LA +  AG+ L+D L   A       + 
Sbjct: 247 RLWISRR---VLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVTGGDLHE 303

Query: 300 QAIDNIRQQISQGQTFHRALEQQALFPTLCQQLVRVGEESGSLDTLLGKLAAWHEQQTFE 359
           QA+  +RQ ++ GQ  ++A+  + LFP L  QL  +GE SG+LD +L K A+ +E+Q  +
Sbjct: 304 QAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHYEEQVSQ 363

Query: 360 LADTLAQTLEPLLMLVVGGIVGTLVIAMYLPIFQLGNVL 398
             D L   LEP ++L++G +VG LV+AMYLPIFQLG+++
Sbjct: 364 ALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402