Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase from Serratia liquefaciens MT49

Subject, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 7e-49
 Identities = 121/350 (34%), Positives = 173/350 (49%), Gaps = 52/350 (14%)

Query: 4   KVAVLLGGTSAEREVSLQSGAAVLAGLREA-------GIDAHGI----DIRDFPVTQ--- 49
           +V ++ GG SAE EVSLQS   ++  L  +       GID  G     D  +F + Q   
Sbjct: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRSRFDPVLIGIDKAGHWHLNDTSNFLLNQENP 64

Query: 50  ------------------------------LKEHGFTKVFIALHGRGGEDGTLQGMLEFL 79
                                         L EH    +F  +HG  GEDG LQG+L   
Sbjct: 65  ALIALNQSNRELAVVPGKANQQLVETSGTGLLEH-VDVIFPIVHGTLGEDGCLQGLLRMA 123

Query: 80  ELPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVALNRQQYAGAEKEALIARIEALGL 139
           +LP+ GS V+ SA+ MDK  +K + +  G+ V P++ L R   A    EA + +   LGL
Sbjct: 124 DLPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNK---LGL 180

Query: 140 PLIVKPSREGSSVGMSKVTERGALEAALEEGFRHDDDVLVEKWLSGPEYTVAMLGDR--- 196
           P+ VKP+ +GSSVG+SKV +     AA+E     D+ VLVE  + G E   A+LG+    
Sbjct: 181 PMFVKPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNENPI 240

Query: 197 VLPSIRIQPAGVFYDYQAKYISDDT-QYFCPSGLGAEQEAEMASLALRAYRGLDCSGWGR 255
                 I  +  FY Y +KYI D   Q   P+ +  E    +  LA+ A+  L CSG  R
Sbjct: 241 ASGCGEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRGLAIEAFEVLGCSGLAR 300

Query: 256 VDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVARILELA 305
           VDV    DG   + E+N+ PG T  S+ P   + +G+S+S+LV+R++ELA
Sbjct: 301 VDVFLTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELA 350