Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase from Serratia liquefaciens MT49

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  315 bits (806), Expect = 1e-90
 Identities = 164/299 (54%), Positives = 207/299 (69%), Gaps = 7/299 (2%)

Query: 4   KVAVLLGGTSAEREVSLQSGAAVLAGLREAGIDAHGIDIRDFPVTQLKEHGFTKVFIALH 63
           +VAVL GG SAEREVSL+SGAAV+  L  AG+D   ID+ D  + +L+     + FI LH
Sbjct: 19  RVAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDVGDDLLARLQSEKIDRAFIILH 78

Query: 64  GRGGEDGTLQGMLEFLELPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVALNRQQYA 123
           GRGGEDG++QG+LE L +PYTGSG++ASAL MDK RTK VWQS+G+P   +  L      
Sbjct: 79  GRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVL------ 132

Query: 124 GAEKEALIARIEALGLPLIVKPSREGSSVGMSKVTERGALEAALEEGFRHDDDVLVEKWL 183
            +E + L A  E LG PLIVKP+ EGSS+GM+KV     L AA ++  ++D  VLVE+W+
Sbjct: 133 ASESDCLQASTE-LGFPLIVKPAHEGSSIGMAKVNSTQELVAAWQDAAKYDSQVLVEQWI 191

Query: 184 SGPEYTVAMLGDRVLPSIRIQPAGVFYDYQAKYISDDTQYFCPSGLGAEQEAEMASLALR 243
            GPE+T+A+L  +VLP I +    VFYDY AKYI +DTQY  P GL + +E E+  L  R
Sbjct: 192 HGPEFTIAVLRGQVLPPIALGTPHVFYDYDAKYIVNDTQYRIPCGLDSVKEQELIDLTAR 251

Query: 244 AYRGLDCSGWGRVDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVARIL 302
           A   +   GWGR+DVMQD  G F+LLEVNT+PGMT HSLVPMAAR +GL F QLV  IL
Sbjct: 252 ACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310