Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase from Serratia liquefaciens MT49

Subject, 364 a.a., D-alanine-D-alanine ligase A from Escherichia coli BL21

 Score =  169 bits (429), Expect = 7e-47
 Identities = 118/352 (33%), Positives = 176/352 (50%), Gaps = 56/352 (15%)

Query: 4   KVAVLLGGTSAEREVSLQSGAAVLAGLREA-------GIDAHG----------------- 39
           +V ++ GG SAE EVSLQS   ++  + ++       GID  G                 
Sbjct: 5   RVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDP 64

Query: 40  --IDIRDFPVTQLKEHGFTK-----------------VFIALHGRGGEDGTLQGMLEFLE 80
             I +R    +  +  G  +                 +F  +HG  GEDG+LQGML    
Sbjct: 65  AHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVAN 124

Query: 81  LPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVAL---NRQQYAGAEKEALIARIEAL 137
           LP+ GS V+ASA  MDK  TK + +  GL +AP++ L   NR   + AE E+       L
Sbjct: 125 LPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVES------KL 178

Query: 138 GLPLIVKPSREGSSVGMSKVTERGALEAALEEGFRHDDDVLVEKWLSGPEYTVAMLGD-- 195
           GLPL VKP+ +GSSVG+SKVT       A++  F  D  V+VE+ + G E   A+LG+  
Sbjct: 179 GLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDN 238

Query: 196 -RVLPSIRIQPAGVFYDYQAKYISDD-TQYFCPSGLGAEQEAEMASLALRAYRGLDCSGW 253
            +      I     FY Y  KYI +D  +   P+ +  E   ++ ++A++AY+ L C+G 
Sbjct: 239 PQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGM 298

Query: 254 GRVDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVARILELA 305
            RVDV    +    + E+NT PG T+ S+ P   + SGL ++ L+ R++ELA
Sbjct: 299 ARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELA 350