Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Serratia liquefaciens MT49

Subject, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

 Score =  337 bits (864), Expect = 5e-97
 Identities = 205/444 (46%), Positives = 264/444 (59%), Gaps = 10/444 (2%)

Query: 9   LADVLSAELIGADCQIVEVTTDTRQVTAGCLFVALKGERFDAHDFAVDAVAAGAGALLVS 68
           L   LSA ++ +DC    V+ D+R +  G LFVAL G RFD HD+  +  A GA   LV 
Sbjct: 10  LTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAVGALV- 68

Query: 69  KRLLVD--VPQLVVKDTRLALGQLAAWVRKQVPARVVALTGSSGKTSVKEMAAAILRECG 126
           +R + D  +PQL+V DTRLALGQL A  R      V A+TGSSGKT+VKE+ A +LR  G
Sbjct: 69  QRAVADSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVLRTRG 128

Query: 127 EVLYTAGNFNNDIGVPLTLLRLQPQHDFAVIELGANHIGEIAYTTALTCPQTALVNNLAA 186
            V  T GN NND G PLTLL L P+H  AVIELGA+ +GEIAYT ALT P   ++NN   
Sbjct: 129 PVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVINNAGT 188

Query: 187 AHLEGFGSLAGVAQAKGEIFTGLPADGVAIINADNNDWPHWQNMLEGKTVWRFSPQAAEG 246
           AH+  FG    + +AKGEI  GL A G+A++N D+  +  W+    G+ V  F+   A  
Sbjct: 189 AHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAAGRKVLTFAVLNA-A 247

Query: 247 VDFFASDVQVNGEG-TQFTLHSPFGTAPIALPLPGRHNVANALAATALAMSAGASLEAVR 305
            DF AS++ V+  G   FTLH+P G   + L L G HNVANALAA A A + G SL  + 
Sbjct: 248 ADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLFGIA 307

Query: 306 QGLKQLQAVPGRLFPIALSAGKLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAEL 365
            GL  +Q V GR      + G  ++DD+YNAN  S+ AA  +L    G +V+V+GD+AEL
Sbjct: 308 TGLGAVQPVKGRTVAQLATNGMRVIDDTYNANQSSICAAIDLLKSFEGRKVLVLGDIAEL 367

Query: 366 GAEAEECHRQVGEAARLAGVDKVLGVGPLSQTLIAAAGNG-EHFQDKA-AVTARVAELLS 423
           G  AE+ HR+VG A     VD +  VGP     ++  G G  HF  +A  + A  A    
Sbjct: 368 GDWAEQSHREVG-AYAAGKVDALYAVGPNMAHAVSVFGPGARHFVTQAELIQALTAAEHD 426

Query: 424 EHAVITVLIKGSRSAAMEQVVRAL 447
           +H   T+LIKGSRSA ME VV AL
Sbjct: 427 KHT--TILIKGSRSAVMENVVAAL 448