Pairwise Alignments

Query, 200 a.a., 3-isopropylmalate dehydratase small subunit from Serratia liquefaciens MT49

Subject, 216 a.a., 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  246 bits (628), Expect = 2e-70
 Identities = 117/205 (57%), Positives = 154/205 (75%), Gaps = 8/205 (3%)

Query: 1   MSKFTQHIGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGQHLFNDWRFLDD-------AG 53
           M KFT H GLV P+D  NVDTDAIIPKQFL+ + +TGFGQ+LF++WR+LD        A 
Sbjct: 1   MQKFTLHKGLVAPMDRENVDTDAIIPKQFLKSIRKTGFGQNLFDEWRYLDKGEPGQDPAS 60

Query: 54  QQPNPEFVLNKPRYKGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNS 113
           ++PNP+FVLN+PRY GAS+LLAR+NFGCGSSREHAPWA+  YGF+ +IAPS+ADIF+ N 
Sbjct: 61  RKPNPDFVLNQPRYAGASVLLARKNFGCGSSREHAPWAIDQYGFRAIIAPSYADIFFNNC 120

Query: 114 FNNQLLPVTLSEQQVDELFKLVADNEGVEFVVDLENQT-VNAGGKSYPFEIDSFRRHCMI 172
           F N LLP+ LSE QV +LF  VA   G +  +DLE Q  V   G   PF++ +FR++C++
Sbjct: 121 FKNGLLPIQLSEAQVAQLFDEVAAFPGYQLTIDLERQVIVKPQGDEIPFDVQAFRKYCLL 180

Query: 173 NGLDSIGLTLQHEADISRYEAQQPA 197
           NGLD IGLTL+++  I+ +EA++ A
Sbjct: 181 NGLDDIGLTLRYKDKIAAFEAERLA 205