Pairwise Alignments

Query, 224 a.a., YtjB family periplasmic protein from Serratia liquefaciens MT49

Subject, 500 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 21/182 (11%)

Query: 3   RAKLKFRLHRTAIILICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLTKQVASSLAP 62
           R  +  R+    +IL+ LAL++     A    L  + A  EQ + L ++LT Q A+S   
Sbjct: 24  RVPIALRIASHNVILVALALVIY----ACVMGLQFKQAMHEQADALGESLTTQTATSATE 79

Query: 63  LMDDDSDVDNQRIDAILKQLTDHSRILDASVYQLDGSLVSHAGEQISIRDRLSLDGKRAG 122
           L+  +   D   ++ +L  LT +  +  A++Y +D  +++ AG+    R +  L G+  G
Sbjct: 80  LLVSN---DILSLNVLLNNLTKNPLVAHAAIYSVDNRIMAEAGQ----RPKNGLLGEAEG 132

Query: 123 SYFNHQLVEPIENKDGPIGFIRITLDTHVLATESKQVDNTTNLLRLMILLALAIGIILAR 182
            Y ++     I  +D   G +RI+LD      +  Q   T +L  + IL A+ + + LA 
Sbjct: 133 LYQSN-----ITFQDVKAGQLRISLD-----MQQFQQPMTISLQSMGILSAILLALALAL 182

Query: 183 TL 184
           +L
Sbjct: 183 SL 184