Pairwise Alignments

Query, 315 a.a., HTH-type transcriptional regulator TreR from Serratia liquefaciens MT49

Subject, 344 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  108 bits (270), Expect = 2e-28
 Identities = 86/324 (26%), Positives = 159/324 (49%), Gaps = 16/324 (4%)

Query: 6   TIKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQSDKVV 65
           TI ++A+ +GV K+TVSRVL+  G V P+ RERVE  I + G+ P+  AR +  ++ + +
Sbjct: 3   TILEVAKRAGVSKATVSRVLSGSGYVGPEKRERVEKAIAETGYRPNLLARNLATKTTQTI 62

Query: 66  GIIVSR--LDSPSENQAVRTMLPLLYQHGFDPIVMESQFETRLVEEHLHVLQQRNVDGVI 123
           G++V+         ++ +     ++ +HG   I+ + +      +  +  L     DGVI
Sbjct: 63  GLVVTNTLYSGNYFSELMFQSARIMEEHGRQLILADGKHTAEEEKAAIQFLLDLRCDGVI 122

Query: 124 LFGFTGLTAAM---LSPWQEKMVVLAREYDGFSSVCY--DDDGAVRLLMERLHQQGHRHI 178
           ++      A M   +S  ++ ++V+ R      S C   D        +  L +QGHR I
Sbjct: 123 IYPRFLSIAEMDEIISQHKQPILVINRRLRLNDSYCIFSDQHATSAAAVRHLIEQGHRDI 182

Query: 179 SYLGVQLSDATTGLRRHQAYLDACRQRGISPHVAL---GELSYQSGFQLAASAIEPQT-- 233
           +++   L D+ TGL R   Y  A  ++GI+ + AL   G+ + QSG     + +   +  
Sbjct: 183 AFITGSL-DSPTGLERLSGYKAALAEQGIAVNSALIVEGKWNAQSGMAAVDTLVASGSAF 241

Query: 234 TALVCASDTIALGAIKYLQQQHI---TPLQVCGIGNTPLLNFLFPETFSVDLGYGSAGLQ 290
           +A+V ++D +A+GAIK L ++ I   + + V G  + PL  +  P   S+ +       +
Sbjct: 242 SAIVASNDEMAIGAIKRLTERQIPVPSAVSVIGFDDIPLAPYTIPSLSSMKMPVTDMIKE 301

Query: 291 AAQQLLGQLSGEQGLRQIIVPSKL 314
              +L+  L G +  ++   P+ L
Sbjct: 302 TINRLVSMLDGGELSKRPTFPASL 325