Pairwise Alignments

Query, 314 a.a., tRNA pseudouridine(55) synthase TruB from Serratia liquefaciens MT49

Subject, 314 a.a., tRNA pseudouridine synthase B from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  508 bits (1307), Expect = e-149
 Identities = 252/312 (80%), Positives = 278/312 (89%)

Query: 1   MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG 60
           MSRPRRRGRDI+GVLLLDKPQG+SSNDALQKVKR+YNANRAGHTGALDPLATGMLPICLG
Sbjct: 1   MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG 60

Query: 61  EATKFSQFLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVNFTQAQLDAALDSFRGDIK 120
           EATKFSQ+LLDSDKRYRVIARLGQRTDTSDADGQIV+ERPV F+  QL AALD+FRGDI+
Sbjct: 61  EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE 120

Query: 121 QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYDLQFIRWEGDELELEIHCSKGTYI 180
           Q+PSMYSALKYQGKKLYEYARQGIEVPREAR ITVY+L FIR EG+ELELEIHCSKGTYI
Sbjct: 121 QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI 180

Query: 181 RTITDDLGELLGCGAHVIYLRRLQVATYPIERMVTLEQLNELLEQAQAQEVAPGELLDPL 240
           RTI DDLGE LGCGAHVIYLRRL V+ YP+ERMVTLE L EL+EQA+ Q++   ELLDPL
Sbjct: 181 RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL 240

Query: 241 LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIADD 300
           LMPMDSP  +YP VNL    + Y K G PV+ +GAP  G+VR+TEGE  KFIG+G+I D+
Sbjct: 241 LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE 300

Query: 301 GRVAPRRLVVEY 312
           GRVAPRRLVVEY
Sbjct: 301 GRVAPRRLVVEY 312