Pairwise Alignments

Query, 459 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Serratia liquefaciens MT49

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 4e-40
 Identities = 125/467 (26%), Positives = 216/467 (46%), Gaps = 38/467 (8%)

Query: 2   RIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIDLIQGYDPAQLDPA 61
           RIH +GI G  M G+A +  +LG++V+GSD     P++  L+  G  +  G+       A
Sbjct: 18  RIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKE-SPVTERLKTFGAQIFIGHRAENAAEA 76

Query: 62  PDLVIIGNAMTRGNPCVEAVLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTTAGMA 121
            D++++ +A+   NP V   LE+ IP V   + L + ++R R  +AVAGTHGKTTT  + 
Sbjct: 77  -DVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLI 134

Query: 122 TWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEADEYDCAFFDKRSKFVHYSPRTL 181
             +  A G  P FVIGG       +A+LG S + + EADE D       + F+H  P   
Sbjct: 135 ASVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESD-------ASFLHLQPLVA 187

Query: 182 IMNNLEFDHADIFD-DLKAIQKQFHHLVRLVPGKGKIILPDNDNHLKQVMAMGCWSEQEL 240
           ++ N++ DH   +D D   ++K F   +  +P  G  ++  +D  +++++ +    ++  
Sbjct: 188 VVTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPL---VKRPT 244

Query: 241 V----GEEGAWRAQKLTPDA--SHYAVFLDGEQVGEVKWSLVGEHNMHNGLMAIAATRHV 294
           V     E+   RA  +  +   + + V     +  +V  ++ G HN+ N L  I      
Sbjct: 245 VTYGFSEDADVRAINVRQEGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDE 304

Query: 295 GVLPADACRALGEFINARRRLELRG----EAHGVTVYDDFAHHPTAILATLAALRGKVGG 350
           GV        L  F    RR ++ G    +   V + DD+ HHPT + A + A+RG    
Sbjct: 305 GVSDEAIVEGLSRFAGVGRRFQVYGQLPVDGGDVMLVDDYGHHPTEVAAVIKAVRGG-WP 363

Query: 351 TARILAVLEPRSNTMKMGISKNDLAPSLGRADEVFLFQPH---HIPWQVAEVAEAC---- 403
             R++ V +P   +    +  +D    L  A+ + L + +     P   A+  + C    
Sbjct: 364 ERRLVMVYQPHRYSRTRDL-YDDFVNVLADANVLLLMEVYPAGEEPIPGADSRKLCNSIR 422

Query: 404 ----VQPAHWSADLDTLVDMIVKTAQPGDHILVMSNGGFGGIHDRLL 446
               + P +    +D L  ++    + GD +L    G  GG+  +LL
Sbjct: 423 QRGQLDPIYIERGVD-LAPIVKPLLRAGDILLCQGAGDIGGLAPKLL 468