Pairwise Alignments

Query, 828 a.a., ribonuclease R from Serratia liquefaciens MT49

Subject, 742 a.a., ribonuclease R from Magnetospirillum magneticum AMB-1

 Score =  390 bits (1002), Expect = e-112
 Identities = 255/716 (35%), Positives = 382/716 (53%), Gaps = 44/716 (6%)

Query: 17  PIPSREFILAHLAKRETPASREELAKELNLTGEEPLEALRRRLRAMERDGQLIFTRRQCY 76
           PIPS++ IL  +  +     + ELA+  NL G + ++ L+  L+ +ER+G +   +++ +
Sbjct: 8   PIPSKQEILDFIRSQPGRVGKRELARAFNLRGSDKID-LKAILKELEREGVVERGQKRRF 66

Query: 77  ALPERLDLLRGTVIGHRDGFGFLRI-------EGSKDDLYLS---AEQMKMAIHGDVVLA 126
           A P  L  +    I   D  G L         EG    ++++   A +  + + GD VLA
Sbjct: 67  ASPGTLPDVGVVEIIGTDSDGELLARPLNYEGEGRPPRIFMAPFRAGEAAVGV-GDRVLA 125

Query: 127 QAMAADRKGRREARIVRVLVPKTSQIVGRFFMDA-GTGFVVPDDSRLSFDILIPADAVSG 185
           +      +   EAR +R++    ++++G F  +  G+G + P   +   + ++P      
Sbjct: 126 KLKRVRGEDVYEARAIRIIGEARARVLGVFEPNPDGSGRLRPTSRKEKAEYMVPRGETGD 185

Query: 186 ARMGFMVVVELTQRPTR----RTKAVGKIVEILGDKMGTSMAVDIALRTHEIPHVWPPQV 241
           A+ G +V+ ++   P R    RT +V + + +LG     S+   +A+ T+++P  +P   
Sbjct: 186 AKAGELVLADIM--PGRLYGMRTASVKERMGLLGAPRSVSL---VAIHTNDVPFEFPEAA 240

Query: 242 EKQVADLSEQVPESAKKGRVDLRKLPLVTIDGEDARDFDDAVYCEK----KRGGGWRLWV 297
            +Q A    + P    + R DLR +PLVTIDGEDARDFDDAV+ E     K  GGW   V
Sbjct: 241 LQQAA---AEGPAPMNE-RTDLRSIPLVTIDGEDARDFDDAVFAEPDPDPKNPGGWHCMV 296

Query: 298 AIADVSYYVRPRTALDDEARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEM 357
           AIADVS+YVRP  +LD EA  RG SVYFP +V+PMLPE LSNG CSL P  DR CM    
Sbjct: 297 AIADVSWYVRPGDSLDKEAFKRGNSVYFPDRVVPMLPEELSNGWCSLKPDEDRPCMAVHF 356

Query: 358 TISAQGRLSTAKFYEAVMSSHARLTYNKVWHILQGDQELREHYHPLVKH-LEELHAMYKV 416
            + A G     +F   +M S ARLTY +V     G  + R    PL+   +E L+  +  
Sbjct: 357 WLDALGNKLHHRFVRGMMRSVARLTYTQVQAAKDGTPDDRTG--PLLAPVIEPLYGAWAA 414

Query: 417 LDQARAERGGIAFETEEAKFIFNAERRIERVEPTVRNDAHKLIEECMIMANVAAARFVEK 476
           L + R ERG +  +  E K     E ++E +    R D+H+LIE+ MIMANV AA  +EK
Sbjct: 415 LFRERKERGVLELDIPERKVTITPEGKVEAITERERFDSHRLIEDFMIMANVCAAETLEK 474

Query: 477 NNEPALFRVHDRPSDDHISALRSVLGELGLTLGGGNKPQPKDYATLMDEVSERPDHEMLQ 536
            ++P ++R+HD PS + +  LR  L  + L L  G   +P  +  +++ V    +  ++ 
Sbjct: 475 VHKPCMYRIHDLPSQEKLDGLREFLSSMDLKLAKGQVLRPAHFNRILEAVEGTANSHLVS 534

Query: 537 TMLLRSMKQAVYDPENRGHFGLALASYGHFTSPIRRYPDLAMHRAIKYQL-AKEHGEPKE 595
            ++LRS  QA Y PEN GHFGL LA Y HFTSPIRRY DL +HRA+   L   E G P +
Sbjct: 535 EVILRSQAQAQYSPENIGHFGLGLARYAHFTSPIRRYADLLVHRALISGLHLGEGGLPAD 594

Query: 596 RWTPTGGWHSEFEEMLQLGEHCSMAERRADEATRNVADWLKCDFMQDHVGEVFSGIIASV 655
                  W          GEH S+ ERRA  A R   D     F+ D VG  F+G ++ V
Sbjct: 595 AVAEFAEW----------GEHISVTERRAATAEREAVDRYVTAFLADKVGATFAGKVSGV 644

Query: 656 TGFGFFVRLNDLFIDGLVHVSSLDNDYYRYDNIGQRLIGESSGVVYRLGDTVEIRV 711
           T FG FV L+    DGLV +S+L  D+Y +D +   L+G+ +   ++LG  +++ +
Sbjct: 645 TRFGLFVTLDQTGADGLVPISTLPEDFYVHDEVHHCLVGKRTRKTFQLGQKLDVEL 700