Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Serratia liquefaciens MT49

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  342 bits (876), Expect = 8e-99
 Identities = 172/301 (57%), Positives = 223/301 (74%), Gaps = 1/301 (0%)

Query: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMIGID 67
           FLQQ+ NG+TLGS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y++ I +A L   GI+
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIE 64

Query: 68  VGWLLIGAAFLVSIVIASAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQG 127
              LLI    + ++V+   YGW IERVAYKP+RNS RL  LISAIG+S+ LQNY  + QG
Sbjct: 65  SFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQG 124

Query: 128 SRDLALPSLVTGQWVLGESNGFAATISTMQLIIWVVTFLAMLALTMFIRYSRMGRACRAC 187
           ++   +P+L+ G W +   +GF     T ++ I V  F  M  LT  I+Y+++GR CRA 
Sbjct: 125 AKQQGIPTLLAGAWRVDIGSGFVQLTYT-KVFILVAAFAGMALLTYVIKYTKLGRMCRAT 183

Query: 188 AEDLKMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAV 247
            +D KMAS+LGINTDRVIS  FVIGA MAA+AGVL+   YG  + Y GF+ G+KAFTAAV
Sbjct: 184 QQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAAV 243

Query: 248 LGGIGSIPGAMIGGLVLGVAEALTSAYLSTEYKDVVSFALLIVVLLIMPTGILGRPEVEK 307
           LGGIGS+PGAM+GG++LG++E+L S  ++++YKDV SF+LL+V+L+  P G+LGRP V K
Sbjct: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGRPLVAK 303

Query: 308 V 308
           V
Sbjct: 304 V 304