Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Serratia liquefaciens MT49

Subject, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  249 bits (636), Expect = 6e-71
 Identities = 128/303 (42%), Positives = 203/303 (66%), Gaps = 15/303 (4%)

Query: 9   LQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMIGIDV 68
           LQQ+ NG+ LGS YAL+A+GYTMVYGIIG+INFAHG+V M+G+  S+ VI  +M     +
Sbjct: 5   LQQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSWTVIGWMMNASTGL 64

Query: 69  G-WLLIGAAFLVSIVIASAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQG 127
             WL++  A ++++V+ +   ++IE++AY+P+RNS RL  LI+AIGMS+ LQ +  +   
Sbjct: 65  PTWLILFLATIIAMVVCATLNFTIEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAMIIWA 124

Query: 128 SRDLALPSLVTGQWV-LGESNGFAATISTMQLIIWVVTFLAMLALTMFIRYSRMGRACRA 186
               + PS+++ + + +G      A +S  Q++I   T + +  L   +  + +GRA RA
Sbjct: 125 PNPKSYPSMLSREPIAIG-----GAVVSVTQVVILATTAVTLAFLMWLVNRTNLGRAMRA 179

Query: 187 CAEDLKMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAA 246
            AE+ ++A+L+GI  D VIS TF+IGA++AA+AGV+    YG +   +GFM G+KAF AA
Sbjct: 180 TAENPRVAALMGIKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGLKAFVAA 239

Query: 247 VLGGIGSIPGAMIGGLVLGVAEALTSAY--------LSTEYKDVVSFALLIVVLLIMPTG 298
           V+GGIG++ GA++GG+ LG+ E+L + Y        L ++Y D+ +F +L +VL + P+G
Sbjct: 240 VMGGIGNLAGAVVGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVLTLRPSG 299

Query: 299 ILG 301
           +LG
Sbjct: 300 LLG 302