Pairwise Alignments

Query, 371 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 372 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  260 bits (664), Expect = 5e-74
 Identities = 140/358 (39%), Positives = 211/358 (58%), Gaps = 5/358 (1%)

Query: 16  MAIGHAAMAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGIKGDKLVGVEYDD 75
           +A G +A A D+ +A+   ++GP A +G     GA QA  DINA GGI G+++  V  DD
Sbjct: 15  VAFGGSAWA-DVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDD 73

Query: 76  ACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGY 135
             DPKQ ++VANK + DG+++V+GH  S  + PAS++Y + G++ ITPAATN   T RG 
Sbjct: 74  VSDPKQGISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEITPAATNPVFTERGL 133

Query: 136 KMIMRTTGLDSDQGPTAAKYILSEIKPKRIAVVHDKQQYGEGLARSVRDSLKKQGTDVVM 195
               RT G D  QG  A KY+    K  ++A++HDK  YG+GLA   + +    G   VM
Sbjct: 134 WNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVM 193

Query: 196 FEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQAGLTTRFMGPEGVGNS 255
           +EG+  GDKDFS L++++K+  V  +Y+GG + E G I+RQA   GL  + +  +G+ ++
Sbjct: 194 YEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSGDGIVSN 253

Query: 256 SLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPFVWTTYAALQSLTAGM 315
            L++IAG A EG L T        P NK +V+  KA   +P   +   +YAA+Q++    
Sbjct: 254 ELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEA-YTLYSYAAMQAIAGAA 312

Query: 316 ERSGSQEPADIVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFEWH--ADGTSTPIK 371
           + +GS EP  + + LK G    T +G +S+D+KGD K   + ++EW    DG  T I+
Sbjct: 313 KAAGSVEPEKVAEALKKGS-FPTALGEISFDEKGDPKLPGYVMYEWKKGPDGKFTYIQ 369