Pairwise Alignments

Query, 371 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

 Score =  273 bits (698), Expect = 5e-78
 Identities = 142/359 (39%), Positives = 217/359 (60%), Gaps = 3/359 (0%)

Query: 5   KGKALLAGCIAMAIGHAAMAK-DIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGI 63
           K K L +  +A +   A +A  +I + ++  ++GPVA YGD    GA+ A+++IN KGGI
Sbjct: 2   KLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGI 61

Query: 64  KGDKLVGVEYDDACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITP 123
            G+++V    DD  +PKQ V+ AN+++ +GI +V+G + S    PASD++ + GV+M+TP
Sbjct: 62  LGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTP 121

Query: 124 AATNADLTTRGYKMIMRTTGLDSDQGPTAAKYILSEIKPKRIAVVHDKQQYGEGLARSVR 183
            AT   LT RG   + RT G D  Q   AAKY+L+ +K K+IA++HDK  YG+GLA S +
Sbjct: 122 TATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSFK 181

Query: 184 DSLKKQGTDVVMFEGITAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQAKQAGLT 243
            +L   G   V+++ +T G+KD   L ARLK +N D VYFGGY+PE G ++RQ K  G  
Sbjct: 182 ATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGSK 241

Query: 244 TRFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPANKPVVDALKAKKLDPTGPFVWT 303
              +G +G+ NS   NI   A EG + T      +   +K   +ALKA  + P   F   
Sbjct: 242 AAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANI-PAEAFTLN 300

Query: 304 TYAALQSLTAGMERSGSQEPAD-IVKDLKTGKPVDTVMGPLSWDDKGDLKGFEFGVFEW 361
            YAA++ L AG+E++GS + ++ + K LK+G+   T +G +++ D GDL    F +F+W
Sbjct: 301 AYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKW 359