Pairwise Alignments

Query, 464 a.a., carbohydrate porin from Serratia liquefaciens MT49

Subject, 473 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 113/461 (24%), Positives = 179/461 (38%), Gaps = 63/461 (13%)

Query: 12  AGLLWVSVGAQAETLQTAKDVEAPTAQWQGVALGFEPPQPGLLGDMLGIRPILEDHGFHY 71
           AGL   S  A AE  + A     P   W+         +  L GD  G+R  L + G   
Sbjct: 28  AGLGLGSAAASAEEAEGA-----PKGFWE---------RETLTGDWGGLRTDLAEKGVKV 73

Query: 72  NLGYLSQLSYNAGGGYNHDRQASYIDQFSLTFSQDLQALTGIPDAA-------LEGNIVN 124
           N  Y +++  NA GG       + + Q  +    DL+   G    A       ++G  ++
Sbjct: 74  NAAYTAEMLGNASGGIKRRAVGNALLQVDV--DADLEQAVGWKGGAFHVTGLHIQGRQLS 131

Query: 125 RNHDNNLTRDRLQDPRVNPTDLSQESYGGQSITRLGWLTFSRSFLERRLQWRIGMMNKVQ 184
            N   NL   R  D    P+            TRL  L   +S L+ ++  R G +   +
Sbjct: 132 ANFIGNLIPVR--DIEAAPS------------TRLFSLWLQQSVLDDKVSLRFGQLPMQE 177

Query: 185 DFDQIIPCDFQTLTLCGGKSANSLTWYNWNVHY----WGTTLQYKLTDGLTFKTGLMEQN 240
           +F   +       +  G   A +    +    Y     GT L+ + T+ L  + G+   N
Sbjct: 178 EFFNSVVATNLINSAFGWPPAFAANLPSGGGGYPLSNLGTRLKVQATEDLAVQAGVFTGN 237

Query: 241 PSAPSRSHAWSWSTKGSKGL-----LLPMELELKTHAVNQ------LPGVYNLGVLFTNA 289
             AP  +       +   G+       PM +    + +NQ      LP ++ LG  + N 
Sbjct: 238 V-APGTNVGNDAQKRNRSGIDYTVDEAPMWMFESQYGLNQAKGAAGLPTMFKLGGWYYNG 296

Query: 290 RQQDLYEGVSG-GPGASDPNGYRSHDRTWFLYSGFNQQLTRHPDDANRGLSLFYSL-GLA 347
           R  D    ++G   G++     ++H   W +Y  ++  L +     + GLS F  + GL 
Sbjct: 297 RATDQRYDIAGVSLGSNAAGAAKTHRGNWAIYGIYDGMLYKEAGTEDLGLSAFLRVTGLP 356

Query: 348 DPRSNYMHYSTSTGIRYRGLFDARPDDWLGLGVSMVKLSDHYRDNQRYLNQLNNATAYND 407
           D R N M     TG+ Y+G  + R DD + +G +   +S           +   ATA   
Sbjct: 357 DDR-NQMPLYVDTGLSYKGPLEGRDDDVVAVGFAFGAMSSSLAARDADARRFGTATA--- 412

Query: 408 PNFRPVPGHSVTAELYYRFNVTPWLQLQPGLQYWHHPGGVS 448
               P   +    EL YR+ VTPW+ L P  QY  HPGG +
Sbjct: 413 ----PDHDYEAAVELTYRYQVTPWMTLVPDAQYVIHPGGTT 449