Pairwise Alignments

Query, 464 a.a., carbohydrate porin from Serratia liquefaciens MT49

Subject, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score = 84.7 bits (208), Expect = 6e-21
 Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 29/245 (11%)

Query: 219 GTTLQYKLTDGLTFKTGLMEQNPSAPSRSHAWSWSTKG------SKGLLLPMELELKTHA 272
           G  ++  LTD +++ T     +P+         W          S+G     E     +A
Sbjct: 239 GARVKLNLTDEVSWMTAAFAGDPAGKFDVRDPQWRNHDGTTFSFSRGTFYITE---GAYA 295

Query: 273 VNQ------LPGVYNLGVLFTNARQQD-----LYEGVSGGPGASDPNGYRSHDRTWFLYS 321
           VNQ      LPG Y LG  + +AR  D     L + ++ G      N  R +   +F+  
Sbjct: 296 VNQEKNSKGLPGTYKLGAWYHSARFNDQHFDNLGQSLASGNTTGIGNPVRGNGGVYFV-- 353

Query: 322 GFNQQLTRHPDDANRGLSLFYSLGLADPRSNYMHYSTSTGIRYRGLFDARPDDWLGLGVS 381
             +Q L +    +  GL +F   G++    N + +    GI Y+GLF  R +D L LGV 
Sbjct: 354 -IDQMLIKGQRWSEEGLGVFLRGGVSPSDRNQVPFYLDGGISYKGLFAGREEDTLALGVG 412

Query: 382 MVKLSDHYRDNQRYLNQLNNATAYNDPNFRPVPGHSVTAELYYRFNVTPWLQLQPGLQYW 441
             +LS   +   R   Q+N          RPV  +    E+ Y+  +TPW  +QP +QY 
Sbjct: 413 YGQLSGSLQGLDRDTRQINGQPT------RPVRDYETVIEVTYQAQITPWWTIQPDVQYV 466

Query: 442 HHPGG 446
            HPGG
Sbjct: 467 IHPGG 471