Pairwise Alignments

Query, 321 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 321 a.a., predicted inner membrane protein (RefSeq) from Escherichia coli BW25113

 Score =  534 bits (1376), Expect = e-156
 Identities = 262/320 (81%), Positives = 284/320 (88%)

Query: 1   MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLT 60
           MISGVLYALLAGLMWGLIFVGPLIVP+YPA+LQSMGRYLALGLIALPIAWLGR RLRQL 
Sbjct: 1   MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLIALPIAWLGRVRLRQLA 60

Query: 61  RKDWSTALSLTLMGNVIYYACLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRL 120
           R+DW TAL LT+MGN+IYY CLASAIQRTGAPVSTMIIGTLPVVIP+FAN+LYSQRDG+L
Sbjct: 61  RRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQRDGKL 120

Query: 121 SWRRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGIVLALISVACWAWYALRNARW 180
           +W +LAPAL  IG GL CVNIAEL+ GL D    RY SGIVLAL+SV CWAWYALRNARW
Sbjct: 121 AWGKLAPALICIGIGLACVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYALRNARW 180

Query: 181 LRENPDKHPMMWATAQALVTLPVSLIGYAAVCLWLSIQKPLFTLPFGPHPALFIGLMIAI 240
           LRENPDKHPMMWATAQALVTLPVSLIGY   C WL+ Q P F+LPFGP P +FI LM+AI
Sbjct: 181 LRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQTPDFSLPFGPRPLVFISLMVAI 240

Query: 241 AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVA 300
           AVLCSWVGALCWN+ASQ LPTVILGPLIVFETLAGLLYTF+LRQ++PP +TLSGIALLV 
Sbjct: 241 AVLCSWVGALCWNVASQLLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVI 300

Query: 301 GVVIAVRAKPEKATVVPVTE 320
           GVVIAVRAKPEK     V+E
Sbjct: 301 GVVIAVRAKPEKPLTESVSE 320