Pairwise Alignments

Query, 306 a.a., L,D-transpeptidase YbiS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 306 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  586 bits (1511), Expect = e-172
 Identities = 283/306 (92%), Positives = 296/306 (96%)

Query: 1   MNMKLTTLFAAAFAVVGFCKTASAVTYPLPTDGSRLIGQNQVITVPEGNTQPLEYFAAEY 60
           MNMKL TLFAAAFAVVGFC TASAVTYPLPTDGSRL+GQNQVIT+PEGNTQPLEYFAAEY
Sbjct: 1   MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEY 60

Query: 61  QMGLSNMLEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIIINSAEMRLYYYPKGTNTV 120
           QMGLSNM+EANPGVDTFLPKGGTVLNIPQQLILPDTVHEGI+INSAEMRLYYYPKGTNTV
Sbjct: 61  QMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTV 120

Query: 121 IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM 180
           IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM
Sbjct: 121 IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM 180

Query: 181 GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNDDIKFLFENVPVGTRVQFIDEPVKA 240
           GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRN+DIKFLFE VPVGTRVQFIDEPVKA
Sbjct: 181 GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKA 240

Query: 241 TTEPDGSRYIEVHNPLSTTEAQFEGKEAVPITLNKSILAVTNEPDVDQTVVQQAVQDRSG 300
           TTEPDGSRYIEVHNPLSTTEAQFEG+E VPITL KS+  VT +PDVDQ V+ +A+++RSG
Sbjct: 241 TTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSG 300

Query: 301 MPVRLN 306
           MPVRLN
Sbjct: 301 MPVRLN 306