Pairwise Alignments

Query, 454 a.a., ATP-dependent RNA helicase RhlE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 487 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

 Score =  418 bits (1075), Expect = e-121
 Identities = 233/488 (47%), Positives = 308/488 (63%), Gaps = 42/488 (8%)

Query: 1   MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           MSF SLGL   +LR + ++ Y+ PTP+Q +AIP VL G+D+MA+AQTGTGKTAGF LPLL
Sbjct: 1   MSFASLGLIDPLLRNLQDRNYQTPTPVQAKAIPVVLNGKDVMAAAQTGTGKTAGFALPLL 60

Query: 61  QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
           Q L+ + P     R  R L+L PTRELA Q+ ++  +Y K L++R L  +GGVSINPQMM
Sbjct: 61  QRLVQNGPAVSSNR-ARVLVLVPTRELAEQVLQSFIEYGKGLDLRFLAAYGGVSINPQMM 119

Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK 180
           KLR GVDVLVATPGRLLDL  QNAV+ DQ++ LVLDEADRMLD+GF  ++  V A LPA+
Sbjct: 120 KLRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAR 179

Query: 181 RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI 240
           RQ LLFSATF+DDI+A+A  +LR+P+ I V+  N  + ++ Q V  VDK+ K EL   ++
Sbjct: 180 RQTLLFSATFTDDIRAMAAGILRDPVNISVSPPNATASKIRQWVVPVDKRNKPELFMHLV 239

Query: 241 GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
            + NW+  LVF +T++G ++LA  L++ G     IHG+K Q AR RAL  FK+ ++++LV
Sbjct: 240 AENNWEHALVFVKTRNGVDYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTREVQMLV 299

Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360
           ATD+AARGLDI++LP V+N +LP V +DYVHRIGRTGRA A+G A+SLVC DE   L  I
Sbjct: 300 ATDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAI 359

Query: 361 EKLLKKEIPRITTPGYEPD----------------------------------PSIKAEP 386
           E L+++ +PR   PG+E +                                  PS K  P
Sbjct: 360 EALIRQTLPREEEPGFEAEHRVPETSATGQIIKKPKKPKKPKVPQVALGATQTPSKKPRP 419

Query: 387 --IQNGRQ---QRGGGGGRGRGQNQGGAGRSQQPRRQDSGAAKAKPKPRTGEGKTAGDKA 441
             ++N R+   QR  G G+      G    S  P       +K   KP  G  K AG  A
Sbjct: 420 QGVENKRKPAAQRAVGAGKVASSTSGTDFTSGSPFSTQKPRSKPATKPAAGSHKPAGKPA 479

Query: 442 --RPPRRP 447
             R  R+P
Sbjct: 480 GGRGKRQP 487