Pairwise Alignments

Query, 454 a.a., ATP-dependent RNA helicase RhlE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 483 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

 Score =  415 bits (1066), Expect = e-120
 Identities = 229/425 (53%), Positives = 296/425 (69%), Gaps = 16/425 (3%)

Query: 2   SFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
           +FD  GL+ DIL+AIAEQGY  PTPIQ QAIP VL GRD+M +AQTGTGKTA F+LP++Q
Sbjct: 12  TFDQFGLHGDILKAIAEQGYTTPTPIQAQAIPVVLGGRDVMGAAQTGTGKTASFSLPIIQ 71

Query: 62  HLI--THQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119
            L+   +   +  R PVRALILTPTRELA Q+  NV+ Y+K+  +RS VVFGGV +NPQ 
Sbjct: 72  RLLPLANTSASPARHPVRALILTPTRELADQVAANVQSYAKHTALRSTVVFGGVDMNPQS 131

Query: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPA 179
            +LR GV++L+ATPGRLLD   Q    L Q+++LVLDEADRMLDMGF+ D++R+L  LP+
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQLLVLDEADRMLDMGFLPDLQRILNLLPS 191

Query: 180 KRQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQM 239
           +RQ LLFSATFS +IK LA   LRNP  IEVAR N+ +  VTQ V+ V +  K   + Q+
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVVQL 251

Query: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
           I + + +QV+VF  +K GA+ LA QL +DG+ + AIHG++SQ  R +AL  FK G+I  L
Sbjct: 252 IRERSLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRSQNERMQALDAFKRGEIEAL 311

Query: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359
           VATD+AARGLDI ELP V+N++LP   EDYVHRIGRTGRA A+G+ALSL   +E K L D
Sbjct: 312 VATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPNERKQLAD 371

Query: 360 IEKLLKK--EIPRITTPGYEPDPSIKAEPIQNG----RQQRGGGGGRGRGQNQ---GGAG 410
           IEKL+K+  E+ R+T      D  ++    + G    R  RGG   R  G ++    G+ 
Sbjct: 372 IEKLIKRPLEVQRLTV-----DTPVRHHHDERGSRRERDDRGGSRRRTTGAHERPSHGSH 426

Query: 411 RSQQP 415
             QQP
Sbjct: 427 HRQQP 431