Pairwise Alignments

Query, 454 a.a., ATP-dependent RNA helicase RhlE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 517 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

 Score =  573 bits (1476), Expect = e-168
 Identities = 301/460 (65%), Positives = 357/460 (77%), Gaps = 9/460 (1%)

Query: 1   MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           MSFDSLGL+  ++RA+ E GY  PTPIQQQAIPAVL G DL+A AQTGTGKTAGFTLP+L
Sbjct: 1   MSFDSLGLSEPLVRAVNELGYTSPTPIQQQAIPAVLNGGDLLAGAQTGTGKTAGFTLPIL 60

Query: 61  QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
           Q L+T  P   G+R VRALILTPTRELAAQ+ E+VR Y KYL ++S V+FGGV INPQ+ 
Sbjct: 61  QRLLTMPPAPGGKRVVRALILTPTRELAAQVEESVRAYGKYLKLKSTVMFGGVGINPQID 120

Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK 180
            LR GVD++VATPGRLLD   Q  + L  +EILVLDEADRMLDMGFIHDI+RVLAKLP K
Sbjct: 121 ALRRGVDIVVATPGRLLDHMQQKTIDLSHLEILVLDEADRMLDMGFIHDIKRVLAKLPPK 180

Query: 181 RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI 240
           RQNLLFSATFSD+IKALA+ LL  P  IEVARRNT +E V Q +H VD+ +KRELL+ +I
Sbjct: 181 RQNLLFSATFSDEIKALADSLLDAPALIEVARRNTTAETVAQKIHPVDRDKKRELLTHLI 240

Query: 241 GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
            Q NW QVLVFTRTKHGAN LAEQL KDGI + AIHGNKSQ ARTRALA+FK+  ++VLV
Sbjct: 241 KQHNWFQVLVFTRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALAEFKNNTLQVLV 300

Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360
           ATDIAARG+DI++LPHVVNY+LPNVPEDYVHRIGRTGRA ATGEA+SLVCVDE +LL+DI
Sbjct: 301 ATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDELQLLKDI 360

Query: 361 EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGG-----GRGRGQNQG-GAGRSQQ 414
           EKL+K+ +P+    G+EPDP+ + EPIQ  R+ +GGGG     G+G+GQ QG    + QQ
Sbjct: 361 EKLIKRAVPQEVIAGFEPDPNARPEPIQ--RRSQGGGGRQPRQGQGQGQGQGQRQAQGQQ 418

Query: 415 PRRQDSGAAKAKPK-PRTGEGKTAGDKARPPRRPRRITPA 453
            R   SGA   + +    G     GDK +   +P+   PA
Sbjct: 419 KREGSSGANNGQSRGGNRGSNDKPGDKPKQHAKPQGQKPA 458