Pairwise Alignments

Query, 368 a.a., ABC transport system, permease component YbhR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 377 a.a., putative multidrug ABC transporter permease YbhS from Escherichia coli ECRC101

 Score =  147 bits (372), Expect = 4e-40
 Identities = 85/336 (25%), Positives = 176/336 (52%), Gaps = 5/336 (1%)

Query: 2   FHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKHS 61
           + R+  L  KE + ++R+P +  I ++  L+ + +F +   L+ +   + I  E   + +
Sbjct: 8   WRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAA 67

Query: 62  VELTQRFARAKAFTHVLLLNSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQP-APMQLI 120
           ++ T        +    + ++ QE+   +   K   LV  P DF+  ++     AP+Q+I
Sbjct: 68  LDFTHTMT-GSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVI 126

Query: 121 LDGRNSNSAQIAANYLQQI--VKEYQQTLMDGKPKPNNSELVVRNWYNPNLDYKWFVVPS 178
            DG   N+A     Y++ I  + + Q+   +G+      ++  R W+NP    + F++P 
Sbjct: 127 TDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPG 186

Query: 179 LIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVL 238
            + +I T+   I+TSL VARE E+GT++ LL + +T  ++ + K +P   +      + +
Sbjct: 187 AVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCM 246

Query: 239 AIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCATQ-QQAFIGVFVFMMPAIL 297
            + ++   +P+ GSL + +F   ++ LS +G GLLIS++   Q   A + +    +P+I+
Sbjct: 247 LVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIM 306

Query: 298 LSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYL 333
           LSG++  +++MP  ++ +T+I P R+F    + ++L
Sbjct: 307 LSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFL 342