Pairwise Alignments

Query, 372 a.a., Macrolide-specific efflux protein MacA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 399 a.a., efflux RND transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

 Score =  241 bits (615), Expect = 3e-68
 Identities = 144/380 (37%), Positives = 204/380 (53%), Gaps = 22/380 (5%)

Query: 8   FKKRYLVIILILLVGGMAGWRMINAPLPTYQTLIVRP--GDLEQSVLATGKLDALRKVDV 65
           F +R   I L L+   +      N P PT  TL       DLEQ+VLA GK++A + V V
Sbjct: 6   FTRRRTTIALGLIAAAVLLHLFFNKPSPTPNTLTTAAEIADLEQTVLADGKIEAQKLVSV 65

Query: 66  GAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAELKL 125
           GAQ SGQ+K L V +GD VKK QL+  ID    ++ +K  EA L  + A+R    AEL+ 
Sbjct: 66  GAQASGQIKALHVELGDKVKKGQLIAEIDDLTQQDTLKNGEAALKNIQAQRAAKLAELRN 125

Query: 126 ARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTNLEYT 185
             ++  RQQ L K    +Q D D+A   +   +A I  +DAQI + + +++TAK NL YT
Sbjct: 126 NELSWQRQQMLMKRGVGAQADYDSAKATLDATRANIDALDAQIIQAQITVNTAKVNLGYT 185

Query: 186 RIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRAGQKAW 245
           +I +PM G V  I    GQTV A Q  P I  +A++ TM +K ++SEADV+ ++ G   W
Sbjct: 186 QIRSPMDGTVVAIPVEAGQTVNAIQTTPTIAKVANLDTMTIKVKISEADVVKVKTGMPVW 245

Query: 246 FTIAGDPQTRYEGVLKDILPTPEKIN-------------------DAIFYYARFEVPNPK 286
           F+I G+P  RYE  L  I P P+ IN                    AI+Y   F+V NP 
Sbjct: 246 FSILGEPNNRYEATLSSIEPAPDSINTDSTTTSSSSSSSTSSSSSTAIYYNGLFDVKNPD 305

Query: 287 RILRLDMTAQVYIQLMDVKNVLIIPLAALGEPVGGNRYKVALLRNGEKREREVVIGERND 346
            +LR+ MTAQVYI L  VKN +++P  AL     G  Y   +  N +   R V +G  ++
Sbjct: 306 GVLRISMTAQVYILLSSVKNAIVVPATALTSR-DGMWYVQVVNANKKVESRLVTLGLNDN 364

Query: 347 TDVEVVKGLEAGDEVIIGES 366
              ++  GL  G++V++  S
Sbjct: 365 VRTQIRSGLSVGEQVVVSPS 384