Pairwise Alignments

Query, 372 a.a., Macrolide-specific efflux protein MacA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 371 a.a., putative membrane protein (VIMSS) from Escherichia coli BW25113

 Score =  602 bits (1552), Expect = e-177
 Identities = 306/367 (83%), Positives = 340/367 (92%)

Query: 4   KGKKFKKRYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV 63
           K K  KKRY++ ++I++ G +  WR++NAP+PTYQTLIVRPGDL+QSVLATGKLDALRKV
Sbjct: 3   KRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKV 62

Query: 64  DVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAEL 123
           DVGAQVSGQLKTL V+IGD VKKDQLLGVIDP+QAENQIKEVEATLMEL A+RQQA AEL
Sbjct: 63  DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAEL 122

Query: 124 KLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTNLE 183
           KLARVT +RQQ+LA+T+AVSQQDLDTAATEMAVKQA+IGTIDAQIKRN+ASLDTAKTNL+
Sbjct: 123 KLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLD 182

Query: 184 YTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRAGQK 243
           YTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMS MLVKAQVSEADVIHL+ GQK
Sbjct: 183 YTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQK 242

Query: 244 AWFTIAGDPQTRYEGVLKDILPTPEKINDAIFYYARFEVPNPKRILRLDMTAQVYIQLMD 303
           AWFT+ GDP TRYEG +KD+LPTPEK+NDAIFYYARFEVPNP  +LRLDMTAQV+IQL D
Sbjct: 243 AWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTD 302

Query: 304 VKNVLIIPLAALGEPVGGNRYKVALLRNGEKREREVVIGERNDTDVEVVKGLEAGDEVII 363
           VKNVL IPL+ALG+PVG NRYKV LLRNGE REREV IG RNDTDVE+VKGLEAGDEV+I
Sbjct: 303 VKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVI 362

Query: 364 GESRPGA 370
           GE++PGA
Sbjct: 363 GEAKPGA 369