Pairwise Alignments

Query, 372 a.a., Macrolide-specific efflux protein MacA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 404 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  233 bits (595), Expect = 5e-66
 Identities = 135/355 (38%), Positives = 201/355 (56%), Gaps = 22/355 (6%)

Query: 32  APLPTYQTLIVRPGDLEQSVLATGKLDALRKVDVGAQVSGQLKTLLVSIGDNVKKDQLLG 91
           AP+P Y T  V    L+Q+VLA G ++A + V VGAQVSGQ++ L VS+GD VK+ QLL 
Sbjct: 32  APVPNYITATVDVRSLQQTVLADGTVNARKLVSVGAQVSGQIRALNVSLGDKVKQGQLLA 91

Query: 92  VIDPDQAENQIKEVEATLMELNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAA 151
            ID    +N +++ +A L ++ A+R    A L+  ++   RQ  L +     Q D D+A 
Sbjct: 92  EIDDLTQQNTLRDSKAALDDIQAQRASRQATLRNNQLNWQRQHNLMQKGLGVQADYDSAK 151

Query: 152 TEMAVKQARIGTIDAQIKRNRASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQ 211
             +   QA I  +DAQI R   +++TA+ NL YT+IV+P+AG V  +   QGQTV A Q 
Sbjct: 152 ATLDAAQADIHALDAQIVRANIAVNTAQVNLAYTKIVSPIAGTVVALPVEQGQTVNAVQS 211

Query: 212 APNILTLADMSTMLVKAQVSEADVIHLRAGQKAWFTIAGDPQTRYEGVLKDILPTPEKIN 271
            P I  +A + TM ++A++SEADVI++R G   WFTI G P  RY+ VL+ I P PE ++
Sbjct: 212 TPTIAKVATLDTMTIEAKISEADVINVRTGMPVWFTILGAPNKRYQAVLRAIEPAPESLS 271

Query: 272 D---------------------AIFYYARFEVPNPKRILRLDMTAQVYIQLMDVKNVLII 310
           +                     AI+Y   F+V NP   LR+ MTAQVYI L + K  ++ 
Sbjct: 272 NESAATSNSTTGSSASSSSSRSAIYYNGLFDVDNPDETLRISMTAQVYILLSEAKRAIVA 331

Query: 311 PLAALGEPVGGNRYKVALLRNGEKREREVVIGERNDTDVEVVKGLEAGDEVIIGE 365
           P++AL     G  +       G    REV  G  ++  ++++ G++ G+EV+I +
Sbjct: 332 PVSALINR-QGKLFVQVTQPQGRPELREVTTGISDNAYIQLLSGVQPGEEVVISQ 385