Pairwise Alignments

Query, 372 a.a., Macrolide-specific efflux protein MacA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  102 bits (255), Expect = 1e-26
 Identities = 96/409 (23%), Positives = 180/409 (44%), Gaps = 48/409 (11%)

Query: 3   AKGKKFKKRYL------VIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGK 56
           AK K  K  Y+      V+IL +++G   GW +  A     +T       + + V A+G 
Sbjct: 2   AKKKSNKLIYILGGVAGVLILFIIIGRALGW-VGGAAETEVETTKASKKTIVEKVSASGV 60

Query: 57  LDALRKVDVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAER 116
           ++   +V +   V+G++  L +S GD+VK++ LL  I PD   + +    A L +  A  
Sbjct: 61  IEPETEVKLSPDVAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTRANLNQQKANL 120

Query: 117 QQAAAELK-------LARVTLARQQQLAKTQAVSQQDLD-------TAATEMAVKQARIG 162
            Q+ A LK        A++   R + L ++  +S  + +       +A  ++   Q  + 
Sbjct: 121 AQSQAALKRSEALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAENDLKAAQQSVE 180

Query: 163 TIDAQIKRNRASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQ--APNILTLAD 220
             +  +K ++AS++ A  NL  T + AP  G V+++   +G+ V+  QQ     +L +AD
Sbjct: 181 AAEYVVKSSQASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQMAGTEMLRIAD 240

Query: 221 MSTMLVKAQVSEADVIHLRAGQKAWFTIAGDPQT--RYEGVLKDILPTPEK--INDAIF- 275
           +S M V   V+E D++ +  G      +     T  ++ GV+  I  +  +    DA+  
Sbjct: 241 LSVMEVVVDVNENDIVRISLGDTTIIEVDAYSHTGEKFTGVVTSIANSANEKATQDAVTE 300

Query: 276 ----------YYARFEVPNPKRILRLDMTAQVYIQLMDVKNVLIIPLAAL---------G 316
                      Y +      +   R  MTA V I      +VL +PLAA+          
Sbjct: 301 FEVEIRILNESYEKLITKENRYPFRPGMTASVEIITEKKADVLSVPLAAVTTRDDIRVDS 360

Query: 317 EPVGGNRYKVALLRNGEKRE-REVVIGERNDTDVEVVKGLEAGDEVIIG 364
                +  ++  +  G K     V  G  +  ++E+++G++ G+E++ G
Sbjct: 361 TNAESDLQEIIFMSEGNKAHLTRVKTGISDFENIEILEGIKEGEELVSG 409