Pairwise Alignments

Query, 553 a.a., Type III secretion transcriptional activator HilA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 225 a.a., DNA-binding response regulator in two-component regulatory system with KdpD (NCBI) from Escherichia coli BW25113

 Score = 50.4 bits (119), Expect = 7e-11
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 16  FDDFILNMDGSLL-RSEKKVNIPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDAEVNEES 74
           F D  +++   ++ R E++V++ P E+ +L +LL  AG+++++  LL+QVWG   V    
Sbjct: 131 FSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSH 190

Query: 75  LTRCIYA--LRRILSEDKEH-RYIETLYGQGYRF 105
             R IY   LR+ L +D    R+  T  G GYRF
Sbjct: 191 YLR-IYMGHLRQKLEQDPARPRHFITETGIGYRF 223