Pairwise Alignments

Query, 553 a.a., Type III secretion transcriptional activator HilA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 740 a.a., DNA-binding winged-HTH domains from Kangiella aquimarina DSM 16071

 Score = 52.0 bits (123), Expect = 8e-11
 Identities = 28/79 (35%), Positives = 44/79 (55%)

Query: 36  IPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDAEVNEESLTRCIYALRRILSEDKEHRYI 95
           I P    VL   L+    +VS+N L++ VW    V + S+ R I  LR+IL++D +  YI
Sbjct: 28  IEPLAMEVLEYFLKHPQRVVSRNELIESVWKGRVVGDHSVYRIINKLRQILAKDSQQEYI 87

Query: 96  ETLYGQGYRFNRPVVVVSP 114
           +T+  +GY+    V +V P
Sbjct: 88  KTIRKKGYQLVCHVELVGP 106