Pairwise Alignments

Query, 348 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 348 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  110 bits (274), Expect = 7e-29
 Identities = 86/335 (25%), Positives = 154/335 (45%), Gaps = 11/335 (3%)

Query: 7   FLLFLLSLLI----SLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILG 62
           F  F L+ L+    +L+   LH+PA  L GP +A  +  L G  L +P  I  A   ++G
Sbjct: 7   FHTFALTALVGSMGALLASLLHIPAPFLSGPALAVTITGLAGVKLGIPAFIRNACFVVVG 66

Query: 63  CMIAQNLTGSILTTLALYWPVVLLVLLVTLLSSAVVGWLLVRYS-SLPGNTGAWGSSPGG 121
             +  ++T S++   A  WP+  +V+LV ++    V + ++ Y       T   G+SPG 
Sbjct: 67  ISMGTSVTPSVIDA-AKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGH 125

Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAAAVSQQVIWFPPLSG 181
            + ++++  +  +D+  V+ +Q +RVL    A  L   LI+       ++ +I  PP+  
Sbjct: 126 LSYIISLGAETKSDLATVSIVQSVRVL----ALTLSVPLIVEYFDLVSTEPLITNPPMGF 181

Query: 182 NVLT-TLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG 240
             L  T+  +++ G      + P+  +L  +      H  G+ E  +P WL    Y+ IG
Sbjct: 182 FTLALTIAASLLTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYVLIG 241

Query: 241 WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL 300
             IG  F         +      +   A+M I   +AW ++    +      +A +PGGL
Sbjct: 242 CLIGTRFSNVSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGL 301

Query: 301 DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAV 335
           +T+AA+A    AD A + +   +RL  + +  P V
Sbjct: 302 ETMAAMAVMMHADTAYVGSHHVIRLLFLSVLMPLV 336



 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 5/160 (3%)

Query: 8   LLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQ-LPRGIFLAAQAILGCMIA 66
           L    SLL   +FL    PAA+LLG +   I   + G T   +P  + L    ++GC+I 
Sbjct: 186 LTIAASLLTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYVLIGCLIG 245

Query: 67  QNLTGSILTTLALYWPVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126
              +   L  +   +    +V +  ++ +  + WL+ R + +P N      +PGG   M 
Sbjct: 246 TRFSNVSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLETMA 305

Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSA 166
           AMA    AD   V     +R+LF++    ++  L++G  A
Sbjct: 306 AMAVMMHADTAYVGSHHVIRLLFLS----VLMPLVMGKDA 341