Pairwise Alignments

Query, 331 a.a., TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 509 a.a., Putative secreted protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  138 bits (348), Expect = 3e-37
 Identities = 95/321 (29%), Positives = 145/321 (45%), Gaps = 45/321 (14%)

Query: 39  DERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTDMKDNTLALFWSEKAAQQG 98
           +ER     E+      L+Q AEQG   AQ+ LG  Y +      D  LA+ W EKA +QG
Sbjct: 26  EERYPADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQG 85

Query: 99  HRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQ 158
              ++  LG+             +A+ WYRK AE   +  Q  LG  Y  G G  QN   
Sbjct: 86  SDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQL 145

Query: 159 ALYWFKQAAL----------QGHCAS-QERLAYMYGNGKGCRKNLSLAALWYKKSALQES 207
           AL W+++AA           QG  +S Q +L  MY +G+G  ++    A+  +K+A    
Sbjct: 146 ALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMY 205

Query: 208 SYSQYQMGYCYYIGKGIKQDYQQAIY---------------------------------- 233
             +Q  +G  Y+ G+G+ QDY+QA+Y                                  
Sbjct: 206 YPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQT 265

Query: 234 WFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDG 293
           W+RK A +       + G  Y  G+ + ++++LALEW+ ++A    +     +G M+  G
Sbjct: 266 WYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQG 325

Query: 294 HGTAQDLQQALYWFKKAQPTG 314
            G +QD QQAL W++KA   G
Sbjct: 326 EGVSQDYQQALAWYRKAARQG 346



 Score =  135 bits (339), Expect = 3e-36
 Identities = 104/352 (29%), Positives = 153/352 (43%), Gaps = 48/352 (13%)

Query: 9   PCDNVSLAQLTELAQSGNSEAQYILGRLYN-DERIDGSEEDKLSFYWLQQAAEQGHCEAQ 67
           P   +++  L +  + G+  + +ILG  YN  E    S +  L   W ++AAE G    Q
Sbjct: 69  PDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALE--WYRKAAELGDSSTQ 126

Query: 68  YWLGLRYKDTPTDMKDNTLALFWSEKAAQ--------QGHRHAFNT---LGWVQEGETGM 116
             LG  Y       ++  LAL W  KAA         +G   A +    LG +     G+
Sbjct: 127 EILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGV 186

Query: 117 APDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYW-------------- 162
             DY Q     RK AE  +  AQ  LG  Y  G GV Q+  QA+YW              
Sbjct: 187 PQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHI 246

Query: 163 --------------------FKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKS 202
                               +++ A +     Q      Y NG    K+ +LA  WY+++
Sbjct: 247 PLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRA 306

Query: 203 ALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQ 262
           A Q  + +Q  +G  +  G+G+ QDYQQA+ W+RKAA QG   A   +G M   G GV Q
Sbjct: 307 AAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQ 366

Query: 263 NYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTG 314
           +   A+ W+ K+A+ + +   Y LG  Y  G G  ++ + AL W+ KA   G
Sbjct: 367 SDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418



 Score =  130 bits (327), Expect = 7e-35
 Identities = 87/290 (30%), Positives = 142/290 (48%), Gaps = 6/290 (2%)

Query: 23  QSGNSEAQYILGRLYNDERIDGSEED-KLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTDM 81
           Q   S AQ+ LG +Y   +  G  +D + +   +++AAE  +  AQ +LG+ Y       
Sbjct: 166 QGSASSAQFKLGVMYAHGQ--GVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVP 223

Query: 82  KDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYN 141
           +D   A++W  +     +      L  + +       D   +  WYRK A++     QYN
Sbjct: 224 QDYRQAVYWLNEGIPGSYTPGHIPLNALYD--KAHPADRVHSQTWYRKTAQRVMAKVQYN 281

Query: 142 LGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKK 201
            G  Y++G  + ++   AL W+++AA QG   +Q+ +  M+  G+G  ++   A  WY+K
Sbjct: 282 FGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRK 341

Query: 202 SALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVE 261
           +A Q    +Q  +G     G+G+ Q  +QAI W+RKAA Q    A   +G  Y  G GV 
Sbjct: 342 AARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVP 401

Query: 262 QNYSLALEWFHKSAECNNSSGWYNLGCMYRDG-HGTAQDLQQALYWFKKA 310
           +N   AL+W+ K+AE   +     LG +Y  G  G  +D +QA  W+  A
Sbjct: 402 ENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMA 451



 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 230 QAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCM 289
           Q +    + A+QGD+ A  S+G  Y  G  V+ +Y LA++W  K+ +  +   ++ LG  
Sbjct: 37  QYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYH 96

Query: 290 YRDGHGTAQDLQQALYWFKKAQPTGKWNVDE 320
           Y  G       Q+AL W++KA   G  +  E
Sbjct: 97  YNYGENFPLSRQKALEWYRKAAELGDSSTQE 127