Pairwise Alignments

Query, 403 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 388 a.a., D-alanyl-D-alanine carboxypeptidase DacD from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  369 bits (948), Expect = e-107
 Identities = 180/362 (49%), Positives = 249/362 (68%), Gaps = 4/362 (1%)

Query: 39  PGVPQIDAESYILIDYNSGKVLAEQNADERRDPASLTKMMTSYVIGQAMKAGKFKETDLV 98
           P  PQI A S++L+DY +G++L   N  ++R+PASLTK+MT YV+ +A+ + +    D+V
Sbjct: 29  PQPPQIQAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88

Query: 99  TVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAF 158
           TVG DAWA  NPVF GSSLMFLK G +V V  L RG+ + SGNDACVA+AD+ AG Q  F
Sbjct: 89  TVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQF 148

Query: 159 VGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYAVYKEKEFT 218
           V +MN+Y   L LK+THF+TVHGLDA GQ+SSA D+A++ +A+I   P  Y +Y EK  T
Sbjct: 149 VEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLT 208

Query: 219 FNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVASATEGQMRLISAVMGGRTYKGRE 278
           +NGI Q NRNGLLWD ++NVDG+KTGHTS AG+NL+ASA +GQ RLI+ +MG  + KGRE
Sbjct: 209 WNGITQQNRNGLLWDKTMNVDGLKTGHTSSAGFNLIASAVDGQRRLIAVIMGADSAKGRE 268

Query: 279 TESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTDRASLGVDKDVYLTIPRGRMKDLK 338
            E++KLL WG + F TV  L  GK+  +E  W+G+ +  +LG +++ ++ +P+  +  +K
Sbjct: 269 EEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIK 328

Query: 339 ASYVLNTAELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKLMF 398
           A Y L+  EL AP+  +Q VG I      K +   PLV L+ + EG+ F ++ DY    F
Sbjct: 329 AKYTLDGKELTAPISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSDY----F 384

Query: 399 HH 400
           HH
Sbjct: 385 HH 386