Pairwise Alignments

Query, 230 a.a., Fimbrial periplasmic chaperone SfmC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 231 a.a., predicted periplasmic pilin chaperone (NCBI) from Escherichia coli BW25113

 Score =  156 bits (394), Expect = 4e-43
 Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 4/225 (1%)

Query: 9   FIVLLTLFTSLNV--QAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENNA 66
           F V+LTL  S  +    AGGI L  TRVIY ++ K+ +L ++N   +  YL+ SW++N  
Sbjct: 6   FAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNID 65

Query: 67  GQKEKTFIVTPPLFVSEPKSENTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEGKN 126
           G+    FI+TPPLF  E   +++LRII     LP ++ESLF++NV+AIP+  KS     N
Sbjct: 66  GKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNAN 125

Query: 127 VLQLAILSRIKLFVRPANLPQTPEDAPTLLKFSRVGNHLKITNPSAYYLTLVNISVGAKK 186
            L L   +RIK+F RPA+L     DA   L+F R  + L I NP+ YY+    ++V    
Sbjct: 126 ELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTD 185

Query: 187 IDNVM--IAPKSDMQIPLPTGAQGNVTFQSVNDYGALTSATTASL 229
           + + +  IAP    Q+PLP     NV + ++NDYG  +   T  L
Sbjct: 186 LTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPL 230