Pairwise Alignments

Query, 230 a.a., Fimbrial periplasmic chaperone SfmC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 233 a.a., predicted periplasmic pilin chaperone (NCBI) from Escherichia coli BW25113

 Score =  163 bits (412), Expect = 3e-45
 Identities = 88/219 (40%), Positives = 130/219 (59%), Gaps = 3/219 (1%)

Query: 5   IKVGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIEN 64
           + V    +L   +S      GGI L ATR++Y    +Q SL + N+     YL+ SW+  
Sbjct: 10  VTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMT 69

Query: 65  NAGQKEKTFIVTPPLFVSEPKSENTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEG 124
              +K   FI+TPPLFV  P +EN LRI+Y G PL  DRE+LF+ +V+A+PS  K   EG
Sbjct: 70  PDNKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKRK-EG 128

Query: 125 KNVLQLAILSRIKLFVRPANLPQTPEDAPTLLKFSRVGNHLKITNPSAYYLTLVNISVGA 184
            N L++A  S IKLF RP  L     +AP  L+ +   + + ++NP+ Y++TL ++ +G 
Sbjct: 129 -NTLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCTSSADMVTVSNPTPYFITLTDLKIGG 187

Query: 185 KKIDNVMIAPKSDMQIPLPTGAQ-GNVTFQSVNDYGALT 222
           K + N MI+P    Q  LP GA+  +VT++++NDYGA T
Sbjct: 188 KVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAET 226