Pairwise Alignments

Query, 390 a.a., Protein AraJ precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 391 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  205 bits (521), Expect = 2e-57
 Identities = 110/350 (31%), Positives = 190/350 (54%), Gaps = 5/350 (1%)

Query: 1   MKKVIFSLALGTFGLGMAEFGIMGVLTELARDVGITIPAAGHMISFYAFGVVLGAPVMAL 60
           M   + +L +  F +G  EF I+G++  +A  + I++P+AG ++S YA GV +GAPV+  
Sbjct: 1   MPLALLALTISAFAIGTTEFVIVGLVPTIANQLAISLPSAGLLVSIYALGVAVGAPVLTA 60

Query: 61  FSSRFSLKHILLFLVMLCVMGNAIFTFSSSYLMLAVGRLVSGFPHGAFFGVGAIVLSKII 120
            + RF  K +L+ L++L   GN +   +  Y  L + RL++G  HG FF +G+ + + ++
Sbjct: 61  LTGRFPRKQLLVALMVLFTAGNVLAWQAPDYTTLVIARLLTGLAHGVFFSIGSTIATSLV 120

Query: 121 RPGKVTAAVAGMVSGMTVANLVGIPFGTYLSQEFSWRYTFLLIAVFNIAVLTAIFFWVP- 179
              K  +A+A M  G+TVA + G+P GT++ Q F WR TFL +++  +  L      VP 
Sbjct: 121 PKEKAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETFLAVSLLGVIALVTSLLLVPS 180

Query: 180 DIRDKAQGSLREQFHFLRSPSPWLIFAATMFGNAGVFAWFSYIKPFMMYISGFSETSMTF 239
           +I  +A  SLR+Q   L  P   +I+A T  G  GVF  F+++ P M  ++GFS  ++++
Sbjct: 181 NIPGRASASLRDQLKVLTHPRLLIIYAVTALGYGGVFTAFTFLAPMMQDLAGFSPNAVSW 240

Query: 240 IMMLVGLGMVLGNLLSGKLSGRYTPLRIAVVTDLVIVLSLMALFFFSGYKTTSLTFAFIC 299
           I++  G+ + +GN+  GKL+ ++  +         +V+ LM   F +     +L    + 
Sbjct: 241 ILLGYGISVAIGNIWGGKLADKHGAVPALKFIFAALVVLLMIFQFTASVHYAALVTVLVM 300

Query: 300 CAGLFALSAPLQILLLQNAK--GGELLGAAGGQ--IAFNLGSAIGAWCGG 345
               F     LQ+ ++Q A+      +  A G    AFN+G A+G+  GG
Sbjct: 301 GIFAFGNVPGLQVYVVQKAELYTPNAVDVASGLNIAAFNIGIALGSIIGG 350