Pairwise Alignments

Query, 253 a.a., Putative fimbrial chaperone from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 246 a.a., putative periplasmic pilin chaperone from Escherichia coli BL21

 Score =  166 bits (421), Expect = 3e-46
 Identities = 100/248 (40%), Positives = 146/248 (58%), Gaps = 12/248 (4%)

Query: 1   MKMDTRHS-ALYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYI 59
           M  +T+H+ AL ++    F    +++S A + I G+R+IY S   SV+V+L+N    P +
Sbjct: 1   MFFNTKHTTALCFVTCMAF----SSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLL 56

Query: 60  VQTWFDDGDMNTSPENSSAMPLIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFN 119
           VQ+W D GD N  P  S  +P  ATPPV RI  K GQ ++++Y  +  LP+DRESVFWFN
Sbjct: 57  VQSWLDTGDDNAEP-GSITVPFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFN 115

Query: 120 VLQVPP-TNIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKTVNKGS-GKS 176
           VL+VPP  +    + Q+ + +  R+RIKLFYRPDGL G P      L +K    GS GK+
Sbjct: 116 VLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSE--APLALKWFWSGSEGKA 173

Query: 177 GIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTL 236
            + + NP P++ S S+ +++ +G  Y +D  MIAPFS +   + G    K+ S  V    
Sbjct: 174 SLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVTGLNG-KASSAKVHFYA 232

Query: 237 VNDLGARI 244
           +ND G  I
Sbjct: 233 INDFGGAI 240