Pairwise Alignments

Query, 326 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 326 a.a., 23S rRNA pseudouridine synthase (NCBI) from Escherichia coli BW25113

 Score =  629 bits (1621), Expect = 0.0
 Identities = 304/326 (93%), Positives = 320/326 (98%)

Query: 1   MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQRVLVNGQLCDKPKEKVL 60
           MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWIL+QRVLVNG++CDKPKEKVL
Sbjct: 1   MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL 60

Query: 61  GGERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL 120
           GGE+VAI+AEI+EE RFE QDIPLDIVYED+DI++INKPRDLVVHPGAGNPDGTVLNALL
Sbjct: 61  GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 121 HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMT 180
           HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQ REITREYEAVAIGHMT
Sbjct: 121 HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT 180

Query: 181 AGGTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM 240
           AGGTV+EPISRHPTKRTHM+VHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM 240

Query: 241 AHITHPLVGDQVYGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPVSGIEMEWHAP 300
           AHITHPLVGD VYGGRPRPPKGASE FISTLRKFDRQALHATMLRLYHP+SGIEMEWHAP
Sbjct: 241 AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 301 IPQDMVDLIDAMRADFEDHKDDVDWL 326
           IPQDMV+LI+ MRADFE+HKD+VDWL
Sbjct: 301 IPQDMVELIEVMRADFEEHKDEVDWL 326