Pairwise Alignments

Query, 326 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 339 a.a., RluA family pseudouridine synthase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  157 bits (397), Expect = 4e-43
 Identities = 114/306 (37%), Positives = 155/306 (50%), Gaps = 23/306 (7%)

Query: 17  GQRLDQALAEMFPDYSRSRIKEWILNQRVLVNGQLCDKPKEKVLGGERVAIDAEIDEEIR 76
           G RLD+ALA  FP  SR+R++  +    V  +G +      K   G   A+         
Sbjct: 30  GARLDKALAGAFPTLSRARLQALLAEGAVSRDGAVLTGGSAKAQPG-LYAVALPPVAPAT 88

Query: 77  FEAQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHY----YPPIADVPRA 132
            + Q IPL ++YED D++VI+KP  +  HP  G PDGT++NALL +       I  V R 
Sbjct: 89  PQPQAIPLTVLYEDADLIVIDKPAGMAAHPAPGTPDGTLVNALLAHCGDSLSGIGGVARP 148

Query: 133 GIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMT-AGGTVNEPISR 191
           GIVHRLDKDT+G+MV AKT  A   L       +I R Y A+  G  + A G ++  I R
Sbjct: 149 GIVHRLDKDTSGVMVAAKTDRAHAGLSALFAAHDIERTYIALTRGAPSPATGRIHTRIGR 208

Query: 192 HPTKRTHMSV-HPMGKPAVTHYRIMEHF---------RVHTRLRLRLETGRTHQIRVHMA 241
               R  M+V    G+ A+T Y +   F          +  R+   L TGRTHQIRVH++
Sbjct: 209 STGDRKKMAVLKAGGREAITDYVVQATFGQPAKAGGAPMAARVACTLHTGRTHQIRVHLS 268

Query: 242 HITHPLVGDQVYG-GRPR-PPKGASEEFISTLRKFDRQALHATMLRLYHPVSGIEMEWHA 299
               P++GD  YG G P  P + A  E        +RQALHA +L   HPV+G  + +  
Sbjct: 269 SKGAPILGDATYGSGSPAIPVRTAIAE-----AALERQALHAAVLGFVHPVTGEVLRFET 323

Query: 300 PIPQDM 305
             P DM
Sbjct: 324 APPYDM 329