Pairwise Alignments

Query, 1289 a.a., IcmF-related protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1206 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  224 bits (571), Expect = 4e-62
 Identities = 272/1146 (23%), Positives = 464/1146 (40%), Gaps = 125/1146 (10%)

Query: 181  GKRFLYELPWFMVVGSPGDGKTTALLNTGLQFPL-----AEQMEQTSRILTVPGGGTLHC 235
            G+R LY LPW++V+G    GK++ +  T  +F L     A+   + ++ +  P G     
Sbjct: 124  GRRALYRLPWYLVLGDEQSGKSSFIDRTDQRFTLTRIDQAQARGRQTQAMAYPVG----- 178

Query: 236  DWWFTNEAVLIDTAGRY-ARHDDGGEASAAQRNAGE--------WQGFLGLLRKHRPGAP 286
             WW +++AV+ID  G + ++    G A+ A   A          W+  LG L++ R    
Sbjct: 179  -WWVSDDAVIIDPPGVFISQKPPVGSAANAPSEASAPPGIQARLWEHLLGWLQRKRSQRA 237

Query: 287  LNGVILTLNVADLTAQSPAERLAACAALRARLAELRETLGIRFPVYLVVTKMDLLPGFSE 346
            LNGV+L +++  L    P +R+A    LR RL E+   LG R P+Y+V+TK DLL GF +
Sbjct: 238  LNGVLLVVDLPALLHGRPEQRVALAHGLRTRLYEVSSQLGARLPLYVVLTKFDLLDGFDQ 297

Query: 347  YFRTLTSHLRAQIWGFTLPYSRRRKAGDP-QALHAACAQELARLTLRLDQGLDTRLQEEY 405
            ++  L +  R  + GFT     +  A D   A      +   RL  +L + +  RL    
Sbjct: 298  FYSQLPAAKRKSLLGFTF----KLDAVDAFDAWLDEYDEHYGRLLTQLQEQVIDRLDVLG 353

Query: 406  DLKSRQRLYTFPREFAALGEPLLEA-IEQIFLDSKFDATQLNNTLRGVFFTSAAQAQADA 464
                  RL++   +   L  P+L+A + +     +F    L   +RGV+++S  Q     
Sbjct: 354  KTAPCGRLFSLHAQLIGL-RPILQAFLRETLASDRFTTPPL---VRGVYWSSVVQ----- 404

Query: 465  VADQLSIWQRFVRAIKTARGESSASLPHALPDGNRS-----YFLHDLLTQFIFREAHLVE 519
               Q  +   FVR    A    +  LP  L +G        YF+     + I++EA L  
Sbjct: 405  ---QGDMRNAFVR---EAAQPYTTKLP--LREGKAQGKALVYFIQQAFRRVIYQEAGLAG 456

Query: 520  PNLQWAWRYR-LLRLGGHLLVLVLAFLLWQGMQTSQQTNGDYLNEISARATRLDG---DV 575
             N++ A   R LL +G  + +L  +  +    Q     NG     + A++    G   D+
Sbjct: 457  DNVRVARSKRHLLWVGSGVGILAFSIAV-ASWQRYADINGAKAASVLAKSQEYSGHEVDM 515

Query: 576  KA-YTGKPAMAPVPALLDSARELSAWPELDPDAPPLAWRYGLYSVPPVTDSVASLYNRLL 634
            +   TG+  +AP+  + D+      +      A P+   +GLY    +   V   Y  LL
Sbjct: 516  RLDPTGRNLLAPLDQIRDAVAVFGDYRA----AWPVVADFGLYQGRNIGPLVDEAYLSLL 571

Query: 635  DQLLLPPLVKRMEYVLADAIARQDSKAAYDALRIYLLLNLDKDHEDKYNAAEIQSWVIND 694
             +  LP L   +  + A   A   S+    ALR+Y ++        ++    ++ W+   
Sbjct: 572  SKRFLPALASGV--IDAMNAAPPGSEQQMAALRVYRMIEDRNSRRPEW----VEDWMARQ 625

Query: 695  LGNSDSVAGFGGRAAVLTHIEALFDGSRVVHSPYEKDEALIRQARAFLDGHTSTERIYAR 754
               +    G   R  ++ H++     +      Y +  + ++QA   L      +R+YA 
Sbjct: 626  WQRAFPGQGQLQR-DLMQHLKYALAYADTDLPQYRQRVSEVQQALRKL---PLPQRVYAG 681

Query: 755  ALAAMESEAPQEFTLVRAVGADAGTVFVRSNGA---PLDRGVPGIFTREGYRELFDKRLP 811
                   +      L   VG     V+  S+GA     D  +  + T +G+RE F+    
Sbjct: 682  LKQQSYQQLHAGLDLRHQVGPAFDVVYQPSSGARQGDEDVRLAAMLTAKGFREYFEPHSQ 741

Query: 812  EFVAAATANDGWVMGRESTPKKLTDSLRSQIPGQE---QSVAREVRRLYLTEYARRWQDF 868
             F   A   D W +G            RSQ+   +    ++   +  LY  +Y   W+  
Sbjct: 742  RFAEMAMV-DQWALGE-----------RSQLDYSDVDRDALTERLYNLYSADYIDSWR-- 787

Query: 869  LDSIHSINSAGEEGSSGLAYDLQVLRTLASPDSPLMRLGKAVVEQTTLVPPPDPQARQKQ 928
                 ++ +        L + + +L  L  P +PL RL   V + T+L PP         
Sbjct: 788  ----RALTAFTVADFRDLDHGVAILEQLTGPAAPLQRLLDTVRDNTSLAPP--------- 834

Query: 929  LAQRASGNAGKV-VQTAKLFQDIHPEERLEKTLVDDRFAALREVIAGRTDGGQSGGGTM- 986
             A  ASG    + V T K      PE++ +   +   FA L  ++    +       T+ 
Sbjct: 835  AAVEASGELSTLRVATGK------PEQQ-QALAIQRAFAGLGAMLQATGEKPSYYDETLG 887

Query: 987  QIASLLTMLNEYYTQLTIADSALAAGTLPARITAAD---KLQLEAAKLPAPLKNILLDLT 1043
             +A++L              +AL A      +T  D    LQ  A  LP P+ + +  L 
Sbjct: 888  AVAAVLDYAKAVQDSPDRGKAALQAVHQRFAMTGQDPIGTLQRIATGLPEPISHQVRKLA 947

Query: 1044 KQGTRKINAGTGDVLNTQMEAMMGDDCRDAIDGRYPFADSPQEVSAEDFNRIFASGGVLD 1103
             Q  + +N      L  + +A +    +  + GRYPF     + S +DF   F   G L 
Sbjct: 948  DQTAQVLNVEALRELERRWDADVYSFFQQRLAGRYPFVVKAPDASLDDFEAFFGPKGRLQ 1007

Query: 1104 AFWSKQLAPLADTASDPWRYKPTEGNMTLQGPDLTPFQQAKQIRSVFFNSEGGKKFSWSM 1163
             F  + L        +  +     G   ++   +   + A++IR  FF+  G  K S   
Sbjct: 1008 QFNDRYLKVFLKDNLEALQ-SAQHGQSLIRADVIEQLELAERIRETFFDQRG--KLSVQF 1064

Query: 1164 QISVVDMDPAIMELVIDIDGQVLRYAHGPDRPLKVTWPGPRNGSMAEITASPRIRQDTST 1223
             I  + +       ++D+DGQ++ Y HGP     + WP      +       R   ++S+
Sbjct: 1065 SIEPLGLSANQRTSLLDLDGQLIAYTHGPSHITGIVWPNTLGQQVRSNLTLLRQNGNSSS 1124

Query: 1224 LLTGGPWALFHLLDAGMVQETAVRGRQLVEYDFDGRR----VVLEITAGRDFNPVSRELL 1279
            L   GPW++F LL  G     A+ GR     D   R     +   + A + FNP++++  
Sbjct: 1125 LEYRGPWSMFRLLSRG-----ALNGRTATSVDLSFRTGDGVMRYRLNAEKAFNPITQQPF 1179

Query: 1280 QNFSCP 1285
            + F  P
Sbjct: 1180 KGFRLP 1185



 Score = 36.6 bits (83), Expect = 1e-05
 Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 17 VGVLVLALLVWFVGPLVSFDTLRPLASVGSR-VVTIALLLMLLVLWL 62
          +G L++ + +W++GP  ++   +PLASV  R V ++ L+L+ L+ WL
Sbjct: 29 LGALLMLVAIWWLGPQWTWREQQPLASVAHRSVASLVLVLVPLLCWL 75