Pairwise Alignments

Query, 89 a.a., Flagellar biosynthesis protein FliQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 90 a.a., Type III secretion inner membrane protein (YscS,homologous to flagellar export components) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 58.5 bits (140), Expect = 2e-14
 Identities = 25/79 (31%), Positives = 49/79 (62%)

Query: 9  MGTEAMKVALALAAPLLLVALITGLIISILQAATQINEMTLSFIPKIVAVFIAIIVAGPW 68
          +  + + ++L L+ P++  A I G +++++QA TQI E TL +  K++A  +A+ +   W
Sbjct: 10 LAVKGLYLSLVLSMPMVAAAAIVGTLMAVIQALTQIQEQTLGYAVKLIATAVALTLTLNW 69

Query: 69 MLNLLLDYVRTLFSNLPYI 87
          + + +L Y R LF  +P+I
Sbjct: 70 IGSEILQYTRQLFDLIPFI 88