Pairwise Alignments

Query, 1026 a.a., Multidrug transporter MdtC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1026 a.a., multidrug efflux RND transporter permease subunit MdtC from Pectobacterium carotovorum WPP14

 Score = 1576 bits (4080), Expect = 0.0
 Identities = 808/1012 (79%), Positives = 901/1012 (89%)

Query: 1    MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA 60
            M+FFALFI+RPVAT+L+  AI LCG+LGFRLLPV+PLPQVDFPVI VSASLPGASPETMA
Sbjct: 1    MKFFALFIHRPVATLLLTLAIALCGVLGFRLLPVSPLPQVDFPVISVSASLPGASPETMA 60

Query: 61   SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP 120
            S+VATPLER+LGRIAGV+EMTS+SSLGSTR+IL FN DRDINGAARDVQAAINAAQ+LLP
Sbjct: 61   SAVATPLERALGRIAGVSEMTSTSSLGSTRVILVFNLDRDINGAARDVQAAINAAQNLLP 120

Query: 121  GGMPSRPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGS 180
             GM SRPTYRK NPSDAP+MILTLTS+++SQG+LYDFASTQL+Q I+Q++GVGDV +GGS
Sbjct: 121  SGMSSRPTYRKVNPSDAPVMILTLTSDTYSQGQLYDFASTQLSQKISQMEGVGDVSIGGS 180

Query: 181  SLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAE 240
            SLPAVRV LNP ALFNQG+SLDEVR+AI  ANVR+P G +E+S   WQIQTNDELKTA  
Sbjct: 181  SLPAVRVALNPVALFNQGISLDEVRQAIAQANVRQPLGNVENSQKSWQIQTNDELKTADA 240

Query: 241  YQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGI 300
            Y PLIIHYNNGAAVRL DVA+V DSVQ+ RNAGM N+KPAIL+MIR+ P+ANII TVD I
Sbjct: 241  YAPLIIHYNNGAAVRLSDVATVEDSVQNSRNAGMANSKPAILVMIRRAPDANIITTVDNI 300

Query: 301  RAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATL 360
            RA +PELRA +PA I L +AQDRSPTIRASL EVE++L I+VALVILVVFLFLRS RAT 
Sbjct: 301  RAAMPELRASLPAEIQLDVAQDRSPTIRASLAEVEQSLVIAVALVILVVFLFLRSARATA 360

Query: 361  IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP 420
            IPA+AVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENI+RH+EAGMKP
Sbjct: 361  IPALAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHIEAGMKP 420

Query: 421  LQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLT 480
            LQA+LQG REVGFTV+SMSLSLVAVF+PLLLM GLPGRL REFAVTLSVAI ISL++SLT
Sbjct: 421  LQASLQGVREVGFTVLSMSLSLVAVFIPLLLMDGLPGRLFREFAVTLSVAIMISLLISLT 480

Query: 481  LTPMMCGWMLKSSKPRTQPRKRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVFLGTVALN 540
            LTPM+C  +L++   R+QPR RG  R+L+A+QQGYG SLKWVLNH R V ++ LGT+ALN
Sbjct: 481  LTPMLCARLLRAVPKRSQPRIRGFNRVLLAMQQGYGRSLKWVLNHARWVLLLLLGTIALN 540

Query: 541  IWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTG 600
            +WLYI+IPKTFFPEQDTG LMG IQADQSISFQAM  KLQ+FM I+  DPAV+NV GFTG
Sbjct: 541  VWLYISIPKTFFPEQDTGRLMGFIQADQSISFQAMTVKLQNFMTIVSSDPAVDNVNGFTG 600

Query: 601  GSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQDIRVGGRQANAS 660
            GSR NSG MFI+LKP  ER  +AQQ+I RLRVKLAKEPGA LFLM VQDIR+GGR+A+A 
Sbjct: 601  GSRTNSGSMFISLKPLSERDVSAQQVISRLRVKLAKEPGANLFLMPVQDIRIGGREASAG 660

Query: 661  YQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYDRDTMSRLGIDV 720
            YQYTLLSD L+ LR WEPKIR A S LP+LADVNSDQQD GAEM L YDRD M++LGI V
Sbjct: 661  YQYTLLSDDLSELRTWEPKIRAAFSKLPELADVNSDQQDKGAEMALTYDRDAMAQLGISV 720

Query: 721  QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVINRDGKAIPLSY 780
             AAN+LLNNAFGQRQISTIYQP+NQYKVVMEVD  Y+QD+S+L KMFVIN +GK IPLSY
Sbjct: 721  SAANALLNNAFGQRQISTIYQPLNQYKVVMEVDDAYTQDVSSLNKMFVINNEGKPIPLSY 780

Query: 781  FAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQATEAINRTMTQLGVPSTVRGSFSG 840
            FA W+P NAPLSVNHQGLSAASTI+FNLP GT LS AT AI RTMT LGVPS VRG FSG
Sbjct: 781  FASWKPINAPLSVNHQGLSAASTISFNLPEGTDLSSATAAIERTMTSLGVPSAVRGQFSG 840

Query: 841  TAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA 900
            TAQ FQQ+ +SQL+LI+AAI TVYIVLG+LYESYVHPLTILSTLPSAGVGALLALE F A
Sbjct: 841  TAQAFQQSQSSQLLLILAAIITVYIVLGVLYESYVHPLTILSTLPSAGVGALLALEWFGA 900

Query: 901  PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLLRFRPIMMTTLA 960
            PFSL+ALIGIMLLIGIVKKNAIMMVDFAL AQRS GL+ + AIFQACLLRFRPIMMTTLA
Sbjct: 901  PFSLVALIGIMLLIGIVKKNAIMMVDFALVAQRSSGLSAQDAIFQACLLRFRPIMMTTLA 960

Query: 961  ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLR 1012
            ALFGALPLVL+ GDG+ELRQPLGITIVGGLVMSQ+LTLYTTPVVYLFFD+LR
Sbjct: 961  ALFGALPLVLTSGDGAELRQPLGITIVGGLVMSQILTLYTTPVVYLFFDKLR 1012